Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR1233-2-201ENST00000408138 82 ntBASIC12.18□□□□□ -0.46
HSPG2P98160 MIR1233-1-201ENST00000408722 82 ntBASIC12.18□□□□□ -0.46
HSPG2P98160 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
HSPG2P98160 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
HSPG2P98160 AC027796.2-201ENST00000575326 344 ntBASIC12.18□□□□□ -0.46
HSPG2P98160 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC12.18□□□□□ -0.46
HSPG2P98160 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
HSPG2P98160 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.17□□□□□ -0.46
HSPG2P98160 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC12.17□□□□□ -0.46
HSPG2P98160 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.17□□□□□ -0.46
HSPG2P98160 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
HSPG2P98160 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 AC079776.4-201ENST00000511039 504 ntBASIC12.17□□□□□ -0.46
HSPG2P98160 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
HSPG2P98160 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC12.17□□□□□ -0.46
HSPG2P98160 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
HSPG2P98160 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.17□□□□□ -0.46
HSPG2P98160 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.17□□□□□ -0.46
HSPG2P98160 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC12.17□□□□□ -0.46
HSPG2P98160 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.17□□□□□ -0.46
HSPG2P98160 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.17□□□□□ -0.46
HSPG2P98160 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.17□□□□□ -0.46
HSPG2P98160 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
HSPG2P98160 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC12.17□□□□□ -0.46
HSPG2P98160 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
HSPG2P98160 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
HSPG2P98160 TOB2P1-201ENST00000469761 992 ntBASIC12.16□□□□□ -0.46
HSPG2P98160 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.16□□□□□ -0.46
HSPG2P98160 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HSPG2P98160 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HSPG2P98160 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HSPG2P98160 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HSPG2P98160 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.16□□□□□ -0.46
HSPG2P98160 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.16□□□□□ -0.46
HSPG2P98160 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
HSPG2P98160 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HSPG2P98160 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HSPG2P98160 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HSPG2P98160 LINC00167-201ENST00000530583 1419 ntBASIC12.16□□□□□ -0.46
HSPG2P98160 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HSPG2P98160 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HSPG2P98160 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.16□□□□□ -0.46
HSPG2P98160 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.16□□□□□ -0.46
HSPG2P98160 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.16□□□□□ -0.46
HSPG2P98160 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HSPG2P98160 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HSPG2P98160 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.16□□□□□ -0.46
HSPG2P98160 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HSPG2P98160 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HSPG2P98160 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HSPG2P98160 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HSPG2P98160 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HSPG2P98160 BX842568.4-201ENST00000421222 227 ntBASIC12.15□□□□□ -0.46
HSPG2P98160 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.15□□□□□ -0.46
HSPG2P98160 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.15□□□□□ -0.46
HSPG2P98160 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.15□□□□□ -0.46
HSPG2P98160 AC055717.3-201ENST00000622967 595 ntBASIC12.15□□□□□ -0.46
HSPG2P98160 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC12.15□□□□□ -0.46
HSPG2P98160 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
HSPG2P98160 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HSPG2P98160 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HSPG2P98160 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.15□□□□□ -0.46
HSPG2P98160 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.15□□□□□ -0.46
HSPG2P98160 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.15□□□□□ -0.46
HSPG2P98160 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.15□□□□□ -0.46
HSPG2P98160 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
HSPG2P98160 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HSPG2P98160 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HSPG2P98160 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HSPG2P98160 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.15□□□□□ -0.46
HSPG2P98160 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HSPG2P98160 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HSPG2P98160 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HSPG2P98160 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HSPG2P98160 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC12.15□□□□□ -0.46
HSPG2P98160 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.46
HSPG2P98160 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.15□□□□□ -0.46
HSPG2P98160 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
HSPG2P98160 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
HSPG2P98160 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
HSPG2P98160 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.15□□□□□ -0.47
HSPG2P98160 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
HSPG2P98160 AC005229.4-201ENST00000610085 2198 ntBASIC12.14□□□□□ -0.47
HSPG2P98160 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HSPG2P98160 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.14□□□□□ -0.47
HSPG2P98160 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms