Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX4P78413 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX4P78413 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.27■□□□□ 0.84
IRX4P78413 AL135905.2-201ENST00000584934 1404 ntBASIC20.27■□□□□ 0.84
IRX4P78413 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IRX4P78413 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.27■□□□□ 0.84
IRX4P78413 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX4P78413 SMG8-203ENST00000578922 2178 ntBASIC20.27■□□□□ 0.84
IRX4P78413 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.27■□□□□ 0.84
IRX4P78413 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
IRX4P78413 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.27■□□□□ 0.84
IRX4P78413 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX4P78413 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IRX4P78413 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX4P78413 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.27■□□□□ 0.84
IRX4P78413 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IRX4P78413 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.27■□□□□ 0.84
IRX4P78413 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.27■□□□□ 0.84
IRX4P78413 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.27■□□□□ 0.84
IRX4P78413 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.27■□□□□ 0.84
IRX4P78413 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX4P78413 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.27■□□□□ 0.84
IRX4P78413 C2orf69P4-201ENST00000565394 541 ntBASIC20.27■□□□□ 0.84
IRX4P78413 AC110285.5-201ENST00000611501 352 ntBASIC20.27■□□□□ 0.84
IRX4P78413 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.27■□□□□ 0.84
IRX4P78413 AC113410.3-201ENST00000623366 203 ntBASIC20.27■□□□□ 0.84
IRX4P78413 AC097493.4-201ENST00000641197 219 ntBASIC20.27■□□□□ 0.84
IRX4P78413 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.27■□□□□ 0.84
IRX4P78413 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX4P78413 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IRX4P78413 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.27■□□□□ 0.83
IRX4P78413 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
IRX4P78413 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
IRX4P78413 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IRX4P78413 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX4P78413 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IRX4P78413 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IRX4P78413 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX4P78413 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX4P78413 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
IRX4P78413 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX4P78413 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX4P78413 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.26■□□□□ 0.83
IRX4P78413 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IRX4P78413 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.26■□□□□ 0.83
IRX4P78413 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX4P78413 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX4P78413 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX4P78413 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX4P78413 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX4P78413 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
IRX4P78413 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX4P78413 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX4P78413 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IRX4P78413 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.26■□□□□ 0.83
IRX4P78413 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.25■□□□□ 0.83
IRX4P78413 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
IRX4P78413 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
IRX4P78413 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
IRX4P78413 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.25■□□□□ 0.83
IRX4P78413 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
IRX4P78413 AL355075.4-201ENST00000554988 638 ntBASIC20.25■□□□□ 0.83
IRX4P78413 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 AC012306.2-201ENST00000609350 630 ntBASIC20.25■□□□□ 0.83
IRX4P78413 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
IRX4P78413 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.25■□□□□ 0.83
IRX4P78413 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.25■□□□□ 0.83
IRX4P78413 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 TCF3P1-201ENST00000423021 1937 ntBASIC20.25■□□□□ 0.83
IRX4P78413 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.25■□□□□ 0.83
IRX4P78413 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX4P78413 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.25■□□□□ 0.83
IRX4P78413 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.24■□□□□ 0.83
IRX4P78413 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.24■□□□□ 0.83
IRX4P78413 KRASP1-201ENST00000407852 552 ntBASIC20.24■□□□□ 0.83
IRX4P78413 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
IRX4P78413 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.24■□□□□ 0.83
IRX4P78413 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX4P78413 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms