Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBA52P62987 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.81■□□□□ 0.28
UBA52P62987 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.8■□□□□ 0.28
UBA52P62987 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA52P62987 AC120498.9-201ENST00000339021 3867 ntBASIC16.8■□□□□ 0.28
UBA52P62987 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA52P62987 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA52P62987 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA52P62987 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA52P62987 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA52P62987 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA52P62987 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA52P62987 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.8■□□□□ 0.28
UBA52P62987 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBA52P62987 AL158047.1-201ENST00000445918 881 ntBASIC16.8■□□□□ 0.28
UBA52P62987 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.8■□□□□ 0.28
UBA52P62987 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.8■□□□□ 0.28
UBA52P62987 AC243732.1-201ENST00000612648 864 ntBASIC16.8■□□□□ 0.28
UBA52P62987 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.8■□□□□ 0.28
UBA52P62987 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
UBA52P62987 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBA52P62987 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.8■□□□□ 0.28
UBA52P62987 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UBA52P62987 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
UBA52P62987 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
UBA52P62987 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA52P62987 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBA52P62987 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA52P62987 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UBA52P62987 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
UBA52P62987 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBA52P62987 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA52P62987 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA52P62987 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.79■□□□□ 0.28
UBA52P62987 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA52P62987 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.79■□□□□ 0.28
UBA52P62987 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.79■□□□□ 0.28
UBA52P62987 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.79■□□□□ 0.28
UBA52P62987 AC128676.1-201ENST00000454392 318 ntBASIC16.79■□□□□ 0.28
UBA52P62987 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.79■□□□□ 0.28
UBA52P62987 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.79■□□□□ 0.28
UBA52P62987 AC142381.4-202ENST00000563973 229 ntBASIC16.79■□□□□ 0.28
UBA52P62987 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.79■□□□□ 0.28
UBA52P62987 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.79■□□□□ 0.28
UBA52P62987 LTB4R2-202ENST00000528054 3092 ntBASIC16.79■□□□□ 0.28
UBA52P62987 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBA52P62987 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.79■□□□□ 0.28
UBA52P62987 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA52P62987 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBA52P62987 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
UBA52P62987 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UBA52P62987 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.79■□□□□ 0.28
UBA52P62987 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
UBA52P62987 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA52P62987 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA52P62987 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA52P62987 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA52P62987 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA52P62987 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
UBA52P62987 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.78■□□□□ 0.28
UBA52P62987 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
UBA52P62987 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.78■□□□□ 0.28
UBA52P62987 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.78■□□□□ 0.28
UBA52P62987 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.78■□□□□ 0.28
UBA52P62987 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
UBA52P62987 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA52P62987 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBA52P62987 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBA52P62987 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.78■□□□□ 0.28
UBA52P62987 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.78■□□□□ 0.28
UBA52P62987 AC007613.1-201ENST00000572811 2597 ntBASIC16.78■□□□□ 0.28
UBA52P62987 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.77■□□□□ 0.28
UBA52P62987 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.77■□□□□ 0.28
UBA52P62987 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 AC005332.8-201ENST00000622750 2735 ntBASIC16.77■□□□□ 0.28
UBA52P62987 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.77■□□□□ 0.28
UBA52P62987 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.77■□□□□ 0.28
UBA52P62987 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
UBA52P62987 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.77■□□□□ 0.28
UBA52P62987 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.77■□□□□ 0.28
UBA52P62987 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.77■□□□□ 0.28
UBA52P62987 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.77■□□□□ 0.28
UBA52P62987 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.77■□□□□ 0.28
UBA52P62987 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
UBA52P62987 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
UBA52P62987 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
UBA52P62987 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms