Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNRPFP62306 ZNF815P-204ENST00000434898 1737 ntBASIC21.28■■□□□ 1
SNRPFP62306 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SNRPFP62306 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNRPFP62306 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.28■■□□□ 1
SNRPFP62306 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNRPFP62306 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNRPFP62306 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.28■■□□□ 1
SNRPFP62306 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNRPFP62306 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
SNRPFP62306 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
SNRPFP62306 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SNRPFP62306 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRPFP62306 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
SNRPFP62306 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SNRPFP62306 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.27■■□□□ 1
SNRPFP62306 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SNRPFP62306 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNRPFP62306 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.27■■□□□ 1
SNRPFP62306 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNRPFP62306 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.27■■□□□ 1
SNRPFP62306 C1QBPP2-201ENST00000528754 825 ntBASIC21.27■■□□□ 1
SNRPFP62306 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.27■■□□□ 1
SNRPFP62306 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.27■■□□□ 1
SNRPFP62306 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNRPFP62306 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.27■■□□□ 1
SNRPFP62306 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRPFP62306 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNRPFP62306 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.27■□□□□ 0.99
SNRPFP62306 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SNRPFP62306 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.26■□□□□ 0.99
SNRPFP62306 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SNRPFP62306 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SNRPFP62306 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.26■□□□□ 0.99
SNRPFP62306 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.26■□□□□ 0.99
SNRPFP62306 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.26■□□□□ 0.99
SNRPFP62306 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SNRPFP62306 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SNRPFP62306 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.26■□□□□ 0.99
SNRPFP62306 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SNRPFP62306 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SNRPFP62306 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SNRPFP62306 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SNRPFP62306 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SNRPFP62306 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNRPFP62306 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.25■□□□□ 0.99
SNRPFP62306 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.25■□□□□ 0.99
SNRPFP62306 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SNRPFP62306 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SNRPFP62306 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.25■□□□□ 0.99
SNRPFP62306 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.25■□□□□ 0.99
SNRPFP62306 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRPFP62306 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRPFP62306 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.25■□□□□ 0.99
SNRPFP62306 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRPFP62306 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SNRPFP62306 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SNRPFP62306 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRPFP62306 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRPFP62306 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNRPFP62306 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.25■□□□□ 0.99
SNRPFP62306 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.25■□□□□ 0.99
SNRPFP62306 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.25■□□□□ 0.99
SNRPFP62306 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.25■□□□□ 0.99
SNRPFP62306 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
SNRPFP62306 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.25■□□□□ 0.99
SNRPFP62306 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRPFP62306 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRPFP62306 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNRPFP62306 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SNRPFP62306 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SNRPFP62306 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNRPFP62306 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNRPFP62306 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SNRPFP62306 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNRPFP62306 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNRPFP62306 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNRPFP62306 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.24■□□□□ 0.99
SNRPFP62306 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNRPFP62306 AL359736.2-201ENST00000621992 437 ntBASIC21.24■□□□□ 0.99
SNRPFP62306 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.24■□□□□ 0.99
SNRPFP62306 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.24■□□□□ 0.99
SNRPFP62306 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.24■□□□□ 0.99
SNRPFP62306 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms