Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.8■□□□□ 0.44
CXCR4P61073 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.8■□□□□ 0.44
CXCR4P61073 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.8■□□□□ 0.44
CXCR4P61073 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.8■□□□□ 0.44
CXCR4P61073 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CXCR4P61073 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CXCR4P61073 AC097381.1-201ENST00000429019 1296 ntBASIC17.8■□□□□ 0.44
CXCR4P61073 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.8■□□□□ 0.44
CXCR4P61073 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.8■□□□□ 0.44
CXCR4P61073 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CXCR4P61073 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CXCR4P61073 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CXCR4P61073 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.79■□□□□ 0.44
CXCR4P61073 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CXCR4P61073 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.79■□□□□ 0.44
CXCR4P61073 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CXCR4P61073 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.79■□□□□ 0.44
CXCR4P61073 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.79■□□□□ 0.44
CXCR4P61073 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CXCR4P61073 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.79■□□□□ 0.44
CXCR4P61073 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.79■□□□□ 0.44
CXCR4P61073 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.79■□□□□ 0.44
CXCR4P61073 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 AC087633.2-202ENST00000565166 1439 ntBASIC17.79■□□□□ 0.44
CXCR4P61073 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CXCR4P61073 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CXCR4P61073 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CXCR4P61073 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CXCR4P61073 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.78■□□□□ 0.44
CXCR4P61073 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.78■□□□□ 0.44
CXCR4P61073 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.78■□□□□ 0.44
CXCR4P61073 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.78■□□□□ 0.44
CXCR4P61073 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.78■□□□□ 0.44
CXCR4P61073 AL133373.2-201ENST00000623187 2828 ntBASIC17.78■□□□□ 0.44
CXCR4P61073 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 AP000997.3-201ENST00000623333 2250 ntBASIC17.78■□□□□ 0.44
CXCR4P61073 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
CXCR4P61073 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXCR4P61073 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.78■□□□□ 0.44
CXCR4P61073 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CXCR4P61073 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CXCR4P61073 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCR4P61073 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.77■□□□□ 0.44
CXCR4P61073 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.77■□□□□ 0.44
CXCR4P61073 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.77■□□□□ 0.44
CXCR4P61073 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCR4P61073 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.77■□□□□ 0.44
CXCR4P61073 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.77■□□□□ 0.44
CXCR4P61073 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCR4P61073 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCR4P61073 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.77■□□□□ 0.44
CXCR4P61073 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCR4P61073 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CXCR4P61073 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CXCR4P61073 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCR4P61073 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.77■□□□□ 0.44
CXCR4P61073 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CXCR4P61073 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXCR4P61073 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms