Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
WNT3AP56704 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3AP56704 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3AP56704 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
WNT3AP56704 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3AP56704 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3AP56704 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
WNT3AP56704 PRKY-204ENST00000533551 1019 ntBASIC19.76■□□□□ 0.75
WNT3AP56704 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.76■□□□□ 0.75
WNT3AP56704 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3AP56704 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3AP56704 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
WNT3AP56704 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.76■□□□□ 0.75
WNT3AP56704 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3AP56704 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3AP56704 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
WNT3AP56704 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
WNT3AP56704 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
WNT3AP56704 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3AP56704 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.75■□□□□ 0.75
WNT3AP56704 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.75■□□□□ 0.75
WNT3AP56704 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
WNT3AP56704 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
WNT3AP56704 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.75■□□□□ 0.75
WNT3AP56704 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.75■□□□□ 0.75
WNT3AP56704 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.75■□□□□ 0.75
WNT3AP56704 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.75■□□□□ 0.75
WNT3AP56704 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
WNT3AP56704 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
WNT3AP56704 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
WNT3AP56704 AC007952.6-201ENST00000573168 2673 ntBASIC19.75■□□□□ 0.75
WNT3AP56704 AC003957.1-201ENST00000625108 2673 ntBASIC19.75■□□□□ 0.75
WNT3AP56704 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
WNT3AP56704 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
WNT3AP56704 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3AP56704 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.74■□□□□ 0.75
WNT3AP56704 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3AP56704 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
WNT3AP56704 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3AP56704 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.74■□□□□ 0.75
WNT3AP56704 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
WNT3AP56704 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
WNT3AP56704 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3AP56704 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.74■□□□□ 0.75
WNT3AP56704 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3AP56704 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.74■□□□□ 0.75
WNT3AP56704 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3AP56704 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.74■□□□□ 0.75
WNT3AP56704 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3AP56704 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.74■□□□□ 0.75
WNT3AP56704 KRT18P16-201ENST00000510337 1294 ntBASIC19.74■□□□□ 0.75
WNT3AP56704 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.74■□□□□ 0.75
WNT3AP56704 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.74■□□□□ 0.75
WNT3AP56704 AC006058.3-201ENST00000606217 1069 ntBASIC19.74■□□□□ 0.75
WNT3AP56704 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
WNT3AP56704 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.74■□□□□ 0.75
WNT3AP56704 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
WNT3AP56704 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.74■□□□□ 0.75
WNT3AP56704 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3AP56704 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3AP56704 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3AP56704 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.74■□□□□ 0.75
WNT3AP56704 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
WNT3AP56704 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
WNT3AP56704 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
WNT3AP56704 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.73■□□□□ 0.75
WNT3AP56704 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
WNT3AP56704 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
WNT3AP56704 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
WNT3AP56704 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
WNT3AP56704 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.73■□□□□ 0.75
WNT3AP56704 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
WNT3AP56704 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.73■□□□□ 0.75
WNT3AP56704 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
WNT3AP56704 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
WNT3AP56704 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
WNT3AP56704 POU5F1P3-201ENST00000428824 1078 ntBASIC19.73■□□□□ 0.75
WNT3AP56704 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.73■□□□□ 0.75
WNT3AP56704 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.73■□□□□ 0.75
WNT3AP56704 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.73■□□□□ 0.75
WNT3AP56704 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.73■□□□□ 0.75
WNT3AP56704 AC073648.6-201ENST00000641589 218 ntBASIC19.73■□□□□ 0.75
WNT3AP56704 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
WNT3AP56704 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
WNT3AP56704 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
WNT3AP56704 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms