Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.55■□□□□ 0.4
GFRA1P56159 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.55■□□□□ 0.4
GFRA1P56159 AC004980.1-204ENST00000429707 299 ntBASIC17.55■□□□□ 0.4
GFRA1P56159 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.55■□□□□ 0.4
GFRA1P56159 AC116562.2-201ENST00000507042 360 ntBASIC17.55■□□□□ 0.4
GFRA1P56159 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA1P56159 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.55■□□□□ 0.4
GFRA1P56159 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.55■□□□□ 0.4
GFRA1P56159 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.55■□□□□ 0.4
GFRA1P56159 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA1P56159 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
GFRA1P56159 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA1P56159 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.55■□□□□ 0.4
GFRA1P56159 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA1P56159 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA1P56159 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA1P56159 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA1P56159 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GFRA1P56159 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.54■□□□□ 0.4
GFRA1P56159 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
GFRA1P56159 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
GFRA1P56159 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
GFRA1P56159 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.54■□□□□ 0.4
GFRA1P56159 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.54■□□□□ 0.4
GFRA1P56159 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.54■□□□□ 0.4
GFRA1P56159 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.54■□□□□ 0.4
GFRA1P56159 TSPY15P-201ENST00000457163 923 ntBASIC17.54■□□□□ 0.4
GFRA1P56159 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
GFRA1P56159 BX088651.1-201ENST00000540551 451 ntBASIC17.54■□□□□ 0.4
GFRA1P56159 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.54■□□□□ 0.4
GFRA1P56159 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.54■□□□□ 0.4
GFRA1P56159 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.54■□□□□ 0.4
GFRA1P56159 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
GFRA1P56159 REXO1L10P-201ENST00000615707 1290 ntBASIC17.54■□□□□ 0.4
GFRA1P56159 REXO1L12P-201ENST00000622156 912 ntBASIC17.54■□□□□ 0.4
GFRA1P56159 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
GFRA1P56159 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GFRA1P56159 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GFRA1P56159 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GFRA1P56159 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
GFRA1P56159 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA1P56159 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.53■□□□□ 0.4
GFRA1P56159 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA1P56159 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
GFRA1P56159 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
GFRA1P56159 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
GFRA1P56159 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA1P56159 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA1P56159 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA1P56159 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.53■□□□□ 0.4
GFRA1P56159 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA1P56159 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.53■□□□□ 0.4
GFRA1P56159 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.53■□□□□ 0.4
GFRA1P56159 AC131212.4-201ENST00000623606 975 ntBASIC17.53■□□□□ 0.4
GFRA1P56159 AC073912.3-201ENST00000624414 853 ntBASIC17.53■□□□□ 0.4
GFRA1P56159 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
GFRA1P56159 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA1P56159 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA1P56159 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA1P56159 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
GFRA1P56159 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA1P56159 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.53■□□□□ 0.4
GFRA1P56159 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA1P56159 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GFRA1P56159 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA1P56159 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA1P56159 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA1P56159 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
GFRA1P56159 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
GFRA1P56159 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.52■□□□□ 0.4
GFRA1P56159 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA1P56159 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
GFRA1P56159 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA1P56159 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.52■□□□□ 0.4
GFRA1P56159 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.52■□□□□ 0.4
GFRA1P56159 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.52■□□□□ 0.4
GFRA1P56159 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
GFRA1P56159 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.52■□□□□ 0.4
GFRA1P56159 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.52■□□□□ 0.4
GFRA1P56159 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GFRA1P56159 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.52■□□□□ 0.39
GFRA1P56159 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GFRA1P56159 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.51■□□□□ 0.39
GFRA1P56159 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GFRA1P56159 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.51■□□□□ 0.39
GFRA1P56159 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GFRA1P56159 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms