Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC22.63■■□□□ 1.21
HMGCS2P54868 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCS2P54868 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCS2P54868 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCS2P54868 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCS2P54868 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
HMGCS2P54868 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.62■■□□□ 1.21
HMGCS2P54868 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
HMGCS2P54868 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCS2P54868 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCS2P54868 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC22.62■■□□□ 1.21
HMGCS2P54868 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.62■■□□□ 1.21
HMGCS2P54868 UPK3BP1-201ENST00000428678 509 ntBASIC22.62■■□□□ 1.21
HMGCS2P54868 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCS2P54868 AL160286.2-201ENST00000567150 934 ntBASIC22.62■■□□□ 1.21
HMGCS2P54868 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.62■■□□□ 1.21
HMGCS2P54868 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
HMGCS2P54868 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
HMGCS2P54868 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCS2P54868 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.62■■□□□ 1.21
HMGCS2P54868 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCS2P54868 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCS2P54868 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCS2P54868 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCS2P54868 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCS2P54868 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCS2P54868 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCS2P54868 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCS2P54868 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCS2P54868 TSPY5P-201ENST00000426936 936 ntBASIC22.61■■□□□ 1.21
HMGCS2P54868 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.61■■□□□ 1.21
HMGCS2P54868 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.61■■□□□ 1.21
HMGCS2P54868 COX11P1-201ENST00000489116 835 ntBASIC22.61■■□□□ 1.21
HMGCS2P54868 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCS2P54868 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.61■■□□□ 1.21
HMGCS2P54868 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.61■■□□□ 1.21
HMGCS2P54868 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCS2P54868 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
HMGCS2P54868 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.6■■□□□ 1.21
HMGCS2P54868 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCS2P54868 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCS2P54868 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCS2P54868 AL031133.1-201ENST00000406807 723 ntBASIC22.6■■□□□ 1.21
HMGCS2P54868 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCS2P54868 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCS2P54868 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCS2P54868 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.6■■□□□ 1.21
HMGCS2P54868 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.6■■□□□ 1.21
HMGCS2P54868 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.6■■□□□ 1.21
HMGCS2P54868 AC091076.1-201ENST00000610741 619 ntBASIC22.6■■□□□ 1.21
HMGCS2P54868 AC141257.4-201ENST00000634557 245 ntBASIC22.6■■□□□ 1.21
HMGCS2P54868 AC136944.6-201ENST00000634818 245 ntBASIC22.6■■□□□ 1.21
HMGCS2P54868 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCS2P54868 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.6■■□□□ 1.21
HMGCS2P54868 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCS2P54868 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HMGCS2P54868 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCS2P54868 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCS2P54868 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
HMGCS2P54868 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.59■■□□□ 1.21
HMGCS2P54868 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.59■■□□□ 1.21
HMGCS2P54868 AP001271.2-201ENST00000624018 1556 ntBASIC22.59■■□□□ 1.21
HMGCS2P54868 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HMGCS2P54868 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
HMGCS2P54868 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC22.59■■□□□ 1.21
HMGCS2P54868 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.59■■□□□ 1.21
HMGCS2P54868 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.59■■□□□ 1.21
HMGCS2P54868 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HMGCS2P54868 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
HMGCS2P54868 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC22.59■■□□□ 1.21
HMGCS2P54868 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HMGCS2P54868 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
HMGCS2P54868 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.59■■□□□ 1.21
HMGCS2P54868 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.59■■□□□ 1.21
HMGCS2P54868 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
HMGCS2P54868 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.58■■□□□ 1.21
HMGCS2P54868 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCS2P54868 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCS2P54868 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCS2P54868 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
HMGCS2P54868 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCS2P54868 FEM1AP1-201ENST00000431297 1995 ntBASIC22.58■■□□□ 1.21
HMGCS2P54868 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCS2P54868 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCS2P54868 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCS2P54868 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCS2P54868 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCS2P54868 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCS2P54868 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
HMGCS2P54868 TSPY17P-201ENST00000450329 467 ntBASIC22.58■■□□□ 1.21
HMGCS2P54868 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
HMGCS2P54868 AC092647.4-201ENST00000457211 535 ntBASIC22.58■■□□□ 1.21
HMGCS2P54868 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.58■■□□□ 1.21
HMGCS2P54868 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCS2P54868 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.58■■□□□ 1.21
HMGCS2P54868 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.58■■□□□ 1.21
HMGCS2P54868 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.58■■□□□ 1.21
HMGCS2P54868 AC011558.1-201ENST00000623459 338 ntBASIC22.58■■□□□ 1.21
HMGCS2P54868 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCS2P54868 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms