Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN5P54829 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PTPN5P54829 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN5P54829 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PTPN5P54829 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN5P54829 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN5P54829 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN5P54829 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PTPN5P54829 PVRIG2P-201ENST00000435460 978 ntBASIC20.21■□□□□ 0.83
PTPN5P54829 AP000347.1-202ENST00000435868 847 ntBASIC20.21■□□□□ 0.83
PTPN5P54829 YBX1P2-201ENST00000489612 999 ntBASIC20.21■□□□□ 0.83
PTPN5P54829 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.21■□□□□ 0.83
PTPN5P54829 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.21■□□□□ 0.83
PTPN5P54829 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PTPN5P54829 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.21■□□□□ 0.83
PTPN5P54829 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN5P54829 GABARAPL3-202ENST00000624044 1851 ntBASIC20.21■□□□□ 0.83
PTPN5P54829 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN5P54829 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN5P54829 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN5P54829 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN5P54829 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
PTPN5P54829 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
PTPN5P54829 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN5P54829 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN5P54829 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN5P54829 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN5P54829 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PTPN5P54829 FSCN1P1-201ENST00000568912 1481 ntBASIC20.2■□□□□ 0.82
PTPN5P54829 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN5P54829 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN5P54829 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN5P54829 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.2■□□□□ 0.82
PTPN5P54829 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN5P54829 AC004263.2-201ENST00000617183 678 ntBASIC20.2■□□□□ 0.82
PTPN5P54829 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.2■□□□□ 0.82
PTPN5P54829 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN5P54829 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.2■□□□□ 0.82
PTPN5P54829 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PTPN5P54829 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN5P54829 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PTPN5P54829 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTPN5P54829 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PTPN5P54829 AC020907.5-201ENST00000624372 1936 ntBASIC20.19■□□□□ 0.82
PTPN5P54829 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN5P54829 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.19■□□□□ 0.82
PTPN5P54829 AP005212.1-201ENST00000581547 1997 ntBASIC20.19■□□□□ 0.82
PTPN5P54829 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN5P54829 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.19■□□□□ 0.82
PTPN5P54829 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN5P54829 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN5P54829 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN5P54829 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN5P54829 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN5P54829 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN5P54829 FDX1P1-201ENST00000449115 551 ntBASIC20.19■□□□□ 0.82
PTPN5P54829 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.19■□□□□ 0.82
PTPN5P54829 AL031985.4-201ENST00000642138 673 ntBASIC20.19■□□□□ 0.82
PTPN5P54829 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.19■□□□□ 0.82
PTPN5P54829 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.19■□□□□ 0.82
PTPN5P54829 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN5P54829 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN5P54829 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN5P54829 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PTPN5P54829 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTPN5P54829 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN5P54829 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPN5P54829 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN5P54829 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPN5P54829 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PTPN5P54829 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
PTPN5P54829 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN5P54829 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN5P54829 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPN5P54829 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPN5P54829 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPN5P54829 DGCR10-201ENST00000609839 495 ntBASIC20.18■□□□□ 0.82
PTPN5P54829 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN5P54829 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.18■□□□□ 0.82
PTPN5P54829 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN5P54829 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPN5P54829 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN5P54829 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.18■□□□□ 0.82
PTPN5P54829 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTPN5P54829 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPN5P54829 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.17■□□□□ 0.82
PTPN5P54829 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 COX11P1-201ENST00000489116 835 ntBASIC20.17■□□□□ 0.82
PTPN5P54829 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.17■□□□□ 0.82
PTPN5P54829 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.17■□□□□ 0.82
PTPN5P54829 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
PTPN5P54829 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms