Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.69■□□□□ 0.74
LIMK2P53671 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.69■□□□□ 0.74
LIMK2P53671 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK2P53671 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK2P53671 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK2P53671 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LIMK2P53671 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.69■□□□□ 0.74
LIMK2P53671 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LIMK2P53671 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LIMK2P53671 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
LIMK2P53671 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.68■□□□□ 0.74
LIMK2P53671 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.68■□□□□ 0.74
LIMK2P53671 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.68■□□□□ 0.74
LIMK2P53671 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.68■□□□□ 0.74
LIMK2P53671 AL359736.2-201ENST00000621992 437 ntBASIC19.68■□□□□ 0.74
LIMK2P53671 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
LIMK2P53671 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.68■□□□□ 0.74
LIMK2P53671 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.68■□□□□ 0.74
LIMK2P53671 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
LIMK2P53671 AL020996.1-203ENST00000536896 2307 ntBASIC19.68■□□□□ 0.74
LIMK2P53671 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LIMK2P53671 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LIMK2P53671 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.67■□□□□ 0.74
LIMK2P53671 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LIMK2P53671 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LIMK2P53671 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LIMK2P53671 UBE2SP1-201ENST00000450587 669 ntBASIC19.67■□□□□ 0.74
LIMK2P53671 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
LIMK2P53671 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.67■□□□□ 0.74
LIMK2P53671 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 SOX15-203ENST00000570788 1093 ntBASIC19.67■□□□□ 0.74
LIMK2P53671 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
LIMK2P53671 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.67■□□□□ 0.74
LIMK2P53671 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
LIMK2P53671 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LIMK2P53671 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LIMK2P53671 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.67■□□□□ 0.74
LIMK2P53671 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LIMK2P53671 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.66■□□□□ 0.74
LIMK2P53671 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIMK2P53671 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIMK2P53671 TNXA-203ENST00000507684 2038 ntBASIC19.66■□□□□ 0.74
LIMK2P53671 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.66■□□□□ 0.74
LIMK2P53671 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
LIMK2P53671 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LIMK2P53671 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LIMK2P53671 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIMK2P53671 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.66■□□□□ 0.74
LIMK2P53671 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
LIMK2P53671 RPS2P4-201ENST00000476944 856 ntBASIC19.66■□□□□ 0.74
LIMK2P53671 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.66■□□□□ 0.74
LIMK2P53671 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.66■□□□□ 0.74
LIMK2P53671 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LIMK2P53671 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LIMK2P53671 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.66■□□□□ 0.74
LIMK2P53671 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LIMK2P53671 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
LIMK2P53671 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LIMK2P53671 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LIMK2P53671 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.66■□□□□ 0.74
LIMK2P53671 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.66■□□□□ 0.74
LIMK2P53671 AL032819.2-201ENST00000624543 2162 ntBASIC19.66■□□□□ 0.74
LIMK2P53671 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LIMK2P53671 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms