Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.99■□□□□ 0.63
PDX1P52945 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PDX1P52945 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PDX1P52945 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 MESTP1-201ENST00000404287 994 ntBASIC18.99■□□□□ 0.63
PDX1P52945 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.99■□□□□ 0.63
PDX1P52945 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.99■□□□□ 0.63
PDX1P52945 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDX1P52945 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.99■□□□□ 0.63
PDX1P52945 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDX1P52945 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.98■□□□□ 0.63
PDX1P52945 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PDX1P52945 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PDX1P52945 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDX1P52945 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDX1P52945 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDX1P52945 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDX1P52945 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDX1P52945 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.98■□□□□ 0.63
PDX1P52945 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDX1P52945 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDX1P52945 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.98■□□□□ 0.63
PDX1P52945 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.98■□□□□ 0.63
PDX1P52945 AL590326.2-201ENST00000625139 305 ntBASIC18.98■□□□□ 0.63
PDX1P52945 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PDX1P52945 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PDX1P52945 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.98■□□□□ 0.63
PDX1P52945 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDX1P52945 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDX1P52945 SLC25A24-204ENST00000569674 2357 ntBASIC18.98■□□□□ 0.63
PDX1P52945 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PDX1P52945 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDX1P52945 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDX1P52945 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.97■□□□□ 0.63
PDX1P52945 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDX1P52945 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDX1P52945 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDX1P52945 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDX1P52945 ARMC10P1-201ENST00000313754 855 ntBASIC18.97■□□□□ 0.63
PDX1P52945 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDX1P52945 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDX1P52945 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.97■□□□□ 0.63
PDX1P52945 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.97■□□□□ 0.63
PDX1P52945 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.97■□□□□ 0.63
PDX1P52945 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.97■□□□□ 0.63
PDX1P52945 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.97■□□□□ 0.63
PDX1P52945 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PDX1P52945 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.97■□□□□ 0.63
PDX1P52945 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.97■□□□□ 0.63
PDX1P52945 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.97■□□□□ 0.63
PDX1P52945 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.97■□□□□ 0.63
PDX1P52945 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.97■□□□□ 0.63
PDX1P52945 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDX1P52945 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PDX1P52945 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.97■□□□□ 0.63
PDX1P52945 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.97■□□□□ 0.63
PDX1P52945 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDX1P52945 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDX1P52945 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.96■□□□□ 0.63
PDX1P52945 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.96■□□□□ 0.63
PDX1P52945 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.96■□□□□ 0.63
PDX1P52945 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDX1P52945 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDX1P52945 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDX1P52945 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
PDX1P52945 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PDX1P52945 SLC25A3P1-201ENST00000443844 931 ntBASIC18.96■□□□□ 0.63
PDX1P52945 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.96■□□□□ 0.63
PDX1P52945 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.96■□□□□ 0.63
PDX1P52945 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.96■□□□□ 0.63
PDX1P52945 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.96■□□□□ 0.63
PDX1P52945 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDX1P52945 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.96■□□□□ 0.63
PDX1P52945 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDX1P52945 KRT18P22-201ENST00000402024 1347 ntBASIC18.96■□□□□ 0.63
PDX1P52945 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDX1P52945 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PDX1P52945 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDX1P52945 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.95■□□□□ 0.62
PDX1P52945 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDX1P52945 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDX1P52945 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.95■□□□□ 0.62
PDX1P52945 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDX1P52945 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDX1P52945 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDX1P52945 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDX1P52945 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDX1P52945 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDX1P52945 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms