Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2A1P52655 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2A1P52655 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GTF2A1P52655 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
GTF2A1P52655 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF2A1P52655 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF2A1P52655 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GTF2A1P52655 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.16■□□□□ 0.66
GTF2A1P52655 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
GTF2A1P52655 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
GTF2A1P52655 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF2A1P52655 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A1P52655 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
GTF2A1P52655 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GTF2A1P52655 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GTF2A1P52655 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GTF2A1P52655 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GTF2A1P52655 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
GTF2A1P52655 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF2A1P52655 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF2A1P52655 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GTF2A1P52655 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF2A1P52655 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF2A1P52655 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GTF2A1P52655 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF2A1P52655 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GTF2A1P52655 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A1P52655 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF2A1P52655 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GTF2A1P52655 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.14■□□□□ 0.66
GTF2A1P52655 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
GTF2A1P52655 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GTF2A1P52655 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GTF2A1P52655 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GTF2A1P52655 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
GTF2A1P52655 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GTF2A1P52655 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A1P52655 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A1P52655 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF2A1P52655 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
GTF2A1P52655 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A1P52655 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A1P52655 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A1P52655 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.14■□□□□ 0.65
GTF2A1P52655 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.14■□□□□ 0.65
GTF2A1P52655 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.14■□□□□ 0.65
GTF2A1P52655 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
GTF2A1P52655 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.14■□□□□ 0.65
GTF2A1P52655 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A1P52655 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A1P52655 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
GTF2A1P52655 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GTF2A1P52655 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF2A1P52655 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
GTF2A1P52655 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A1P52655 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A1P52655 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A1P52655 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A1P52655 FP700111.2-201ENST00000619190 1892 ntBASIC19.14■□□□□ 0.65
GTF2A1P52655 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF2A1P52655 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF2A1P52655 AC135776.1-201ENST00000319817 2481 ntBASIC19.13■□□□□ 0.65
GTF2A1P52655 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
GTF2A1P52655 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF2A1P52655 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF2A1P52655 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.13■□□□□ 0.65
GTF2A1P52655 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
GTF2A1P52655 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.13■□□□□ 0.65
GTF2A1P52655 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.13■□□□□ 0.65
GTF2A1P52655 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.13■□□□□ 0.65
GTF2A1P52655 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF2A1P52655 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
GTF2A1P52655 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms