Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.17■□□□□ 0.34
CX3CR1P49238 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CX3CR1P49238 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CX3CR1P49238 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.16■□□□□ 0.34
CX3CR1P49238 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CX3CR1P49238 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CX3CR1P49238 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.16■□□□□ 0.34
CX3CR1P49238 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.16■□□□□ 0.34
CX3CR1P49238 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.16■□□□□ 0.34
CX3CR1P49238 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CX3CR1P49238 AC091874.3-201ENST00000512672 1195 ntBASIC17.16■□□□□ 0.34
CX3CR1P49238 AC005829.2-201ENST00000571422 1056 ntBASIC17.16■□□□□ 0.34
CX3CR1P49238 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.16■□□□□ 0.34
CX3CR1P49238 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CX3CR1P49238 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CX3CR1P49238 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CX3CR1P49238 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CX3CR1P49238 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CX3CR1P49238 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CX3CR1P49238 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.16■□□□□ 0.34
CX3CR1P49238 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.16■□□□□ 0.34
CX3CR1P49238 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CX3CR1P49238 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.15■□□□□ 0.34
CX3CR1P49238 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.15■□□□□ 0.34
CX3CR1P49238 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.15■□□□□ 0.34
CX3CR1P49238 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.15■□□□□ 0.34
CX3CR1P49238 AC073210.2-201ENST00000430369 194 ntBASIC17.15■□□□□ 0.34
CX3CR1P49238 NCF1B-203ENST00000435988 1254 ntBASIC17.15■□□□□ 0.34
CX3CR1P49238 GUSBP6-202ENST00000438529 1198 ntBASIC17.15■□□□□ 0.34
CX3CR1P49238 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.15■□□□□ 0.34
CX3CR1P49238 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.15■□□□□ 0.34
CX3CR1P49238 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.15■□□□□ 0.34
CX3CR1P49238 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CX3CR1P49238 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.15■□□□□ 0.34
CX3CR1P49238 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CX3CR1P49238 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.15■□□□□ 0.34
CX3CR1P49238 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 AC098818.2-201ENST00000564925 2320 ntBASIC17.14■□□□□ 0.33
CX3CR1P49238 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CX3CR1P49238 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.14■□□□□ 0.33
CX3CR1P49238 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CX3CR1P49238 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.14■□□□□ 0.33
CX3CR1P49238 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 TSPY6P-201ENST00000448518 926 ntBASIC17.14■□□□□ 0.33
CX3CR1P49238 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.14■□□□□ 0.33
CX3CR1P49238 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.14■□□□□ 0.33
CX3CR1P49238 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.14■□□□□ 0.33
CX3CR1P49238 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.14■□□□□ 0.33
CX3CR1P49238 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.14■□□□□ 0.33
CX3CR1P49238 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.14■□□□□ 0.33
CX3CR1P49238 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.14■□□□□ 0.33
CX3CR1P49238 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CX3CR1P49238 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CX3CR1P49238 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.13■□□□□ 0.33
CX3CR1P49238 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CX3CR1P49238 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.13■□□□□ 0.33
CX3CR1P49238 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CX3CR1P49238 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CX3CR1P49238 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CX3CR1P49238 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CX3CR1P49238 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CX3CR1P49238 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms