Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1A1P48729 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1A1P48729 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1A1P48729 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CSNK1A1P48729 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CSNK1A1P48729 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CSNK1A1P48729 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.39■□□□□ 0.38
CSNK1A1P48729 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1A1P48729 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1A1P48729 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1A1P48729 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CSNK1A1P48729 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1A1P48729 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CSNK1A1P48729 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.39■□□□□ 0.37
CSNK1A1P48729 KRT17P3-201ENST00000420566 1262 ntBASIC17.39■□□□□ 0.37
CSNK1A1P48729 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.39■□□□□ 0.37
CSNK1A1P48729 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.39■□□□□ 0.37
CSNK1A1P48729 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.39■□□□□ 0.37
CSNK1A1P48729 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1A1P48729 CD99P1-205ENST00000527459 561 ntBASIC17.39■□□□□ 0.37
CSNK1A1P48729 PRKY-204ENST00000533551 1019 ntBASIC17.39■□□□□ 0.37
CSNK1A1P48729 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.39■□□□□ 0.37
CSNK1A1P48729 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1A1P48729 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1A1P48729 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1A1P48729 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1A1P48729 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CSNK1A1P48729 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.38■□□□□ 0.37
CSNK1A1P48729 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.38■□□□□ 0.37
CSNK1A1P48729 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CSNK1A1P48729 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1A1P48729 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.38■□□□□ 0.37
CSNK1A1P48729 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CSNK1A1P48729 ESRRAP1-201ENST00000400596 1257 ntBASIC17.38■□□□□ 0.37
CSNK1A1P48729 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1A1P48729 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
CSNK1A1P48729 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.38■□□□□ 0.37
CSNK1A1P48729 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.38■□□□□ 0.37
CSNK1A1P48729 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.38■□□□□ 0.37
CSNK1A1P48729 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CSNK1A1P48729 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.38■□□□□ 0.37
CSNK1A1P48729 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSNK1A1P48729 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1A1P48729 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1A1P48729 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1A1P48729 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1A1P48729 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1A1P48729 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1A1P48729 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 YBX1P10-201ENST00000444752 975 ntBASIC17.37■□□□□ 0.37
CSNK1A1P48729 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1A1P48729 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1A1P48729 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1A1P48729 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1A1P48729 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1A1P48729 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
CSNK1A1P48729 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSNK1A1P48729 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1A1P48729 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1A1P48729 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.36■□□□□ 0.37
CSNK1A1P48729 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1A1P48729 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CSNK1A1P48729 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1A1P48729 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1A1P48729 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.36■□□□□ 0.37
CSNK1A1P48729 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.36■□□□□ 0.37
CSNK1A1P48729 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1A1P48729 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.36■□□□□ 0.37
CSNK1A1P48729 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSNK1A1P48729 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms