Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HADHAP40939 AC008687.6-201ENST00000596318 630 ntBASIC19.76■□□□□ 0.75
HADHAP40939 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.76■□□□□ 0.75
HADHAP40939 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.76■□□□□ 0.75
HADHAP40939 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HADHAP40939 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.76■□□□□ 0.75
HADHAP40939 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HADHAP40939 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.76■□□□□ 0.75
HADHAP40939 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HADHAP40939 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.75■□□□□ 0.75
HADHAP40939 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HADHAP40939 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.75■□□□□ 0.75
HADHAP40939 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.75■□□□□ 0.75
HADHAP40939 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.75■□□□□ 0.75
HADHAP40939 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HADHAP40939 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.75■□□□□ 0.75
HADHAP40939 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.75■□□□□ 0.75
HADHAP40939 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.75■□□□□ 0.75
HADHAP40939 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.75■□□□□ 0.75
HADHAP40939 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
HADHAP40939 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HADHAP40939 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.75■□□□□ 0.75
HADHAP40939 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HADHAP40939 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HADHAP40939 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HADHAP40939 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HADHAP40939 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.74■□□□□ 0.75
HADHAP40939 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HADHAP40939 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HADHAP40939 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.74■□□□□ 0.75
HADHAP40939 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HADHAP40939 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HADHAP40939 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HADHAP40939 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HADHAP40939 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.74■□□□□ 0.75
HADHAP40939 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.74■□□□□ 0.75
HADHAP40939 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.74■□□□□ 0.75
HADHAP40939 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.74■□□□□ 0.75
HADHAP40939 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
HADHAP40939 CD99P1-205ENST00000527459 561 ntBASIC19.74■□□□□ 0.75
HADHAP40939 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HADHAP40939 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HADHAP40939 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HADHAP40939 AL121906.2-201ENST00000621597 723 ntBASIC19.74■□□□□ 0.75
HADHAP40939 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HADHAP40939 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HADHAP40939 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HADHAP40939 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.74■□□□□ 0.75
HADHAP40939 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.74■□□□□ 0.75
HADHAP40939 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HADHAP40939 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HADHAP40939 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HADHAP40939 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HADHAP40939 Z82202.1-201ENST00000623446 1880 ntBASIC19.73■□□□□ 0.75
HADHAP40939 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HADHAP40939 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HADHAP40939 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HADHAP40939 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HADHAP40939 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.73■□□□□ 0.75
HADHAP40939 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HADHAP40939 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.73■□□□□ 0.75
HADHAP40939 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HADHAP40939 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HADHAP40939 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.73■□□□□ 0.75
HADHAP40939 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.73■□□□□ 0.75
HADHAP40939 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.73■□□□□ 0.75
HADHAP40939 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.73■□□□□ 0.75
HADHAP40939 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HADHAP40939 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HADHAP40939 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HADHAP40939 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HADHAP40939 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HADHAP40939 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HADHAP40939 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.72■□□□□ 0.75
HADHAP40939 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HADHAP40939 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HADHAP40939 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HADHAP40939 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HADHAP40939 TFP1-202ENST00000475455 1573 ntBASIC19.72■□□□□ 0.75
HADHAP40939 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
HADHAP40939 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HADHAP40939 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HADHAP40939 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HADHAP40939 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HADHAP40939 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HADHAP40939 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HADHAP40939 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms