Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GRIK1P39086 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GRIK1P39086 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GRIK1P39086 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GRIK1P39086 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
GRIK1P39086 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.62■□□□□ 0.89
GRIK1P39086 BX088651.1-201ENST00000540551 451 ntBASIC20.62■□□□□ 0.89
GRIK1P39086 REXO1L12P-201ENST00000622156 912 ntBASIC20.62■□□□□ 0.89
GRIK1P39086 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
GRIK1P39086 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GRIK1P39086 LINC01521-201ENST00000504184 1943 ntBASIC20.62■□□□□ 0.89
GRIK1P39086 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.62■□□□□ 0.89
GRIK1P39086 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.62■□□□□ 0.89
GRIK1P39086 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GRIK1P39086 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.62■□□□□ 0.89
GRIK1P39086 KRT8P8-201ENST00000434750 1448 ntBASIC20.61■□□□□ 0.89
GRIK1P39086 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GRIK1P39086 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GRIK1P39086 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GRIK1P39086 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.61■□□□□ 0.89
GRIK1P39086 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.61■□□□□ 0.89
GRIK1P39086 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.61■□□□□ 0.89
GRIK1P39086 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.61■□□□□ 0.89
GRIK1P39086 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GRIK1P39086 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GRIK1P39086 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
GRIK1P39086 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GRIK1P39086 TCF3P1-201ENST00000423021 1937 ntBASIC20.61■□□□□ 0.89
GRIK1P39086 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GRIK1P39086 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
GRIK1P39086 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
GRIK1P39086 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.6■□□□□ 0.89
GRIK1P39086 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
GRIK1P39086 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.6■□□□□ 0.89
GRIK1P39086 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.6■□□□□ 0.89
GRIK1P39086 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.6■□□□□ 0.89
GRIK1P39086 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.6■□□□□ 0.89
GRIK1P39086 AL445675.2-201ENST00000620291 557 ntBASIC20.6■□□□□ 0.89
GRIK1P39086 AL031985.4-201ENST00000642138 673 ntBASIC20.6■□□□□ 0.89
GRIK1P39086 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
GRIK1P39086 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
GRIK1P39086 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.6■□□□□ 0.89
GRIK1P39086 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.6■□□□□ 0.89
GRIK1P39086 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GRIK1P39086 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.59■□□□□ 0.89
GRIK1P39086 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
GRIK1P39086 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.59■□□□□ 0.89
GRIK1P39086 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.59■□□□□ 0.89
GRIK1P39086 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
GRIK1P39086 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.59■□□□□ 0.89
GRIK1P39086 REXO1L10P-201ENST00000615707 1290 ntBASIC20.59■□□□□ 0.89
GRIK1P39086 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.59■□□□□ 0.89
GRIK1P39086 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GRIK1P39086 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
GRIK1P39086 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
GRIK1P39086 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.59■□□□□ 0.89
GRIK1P39086 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
GRIK1P39086 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
GRIK1P39086 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
GRIK1P39086 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
GRIK1P39086 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
GRIK1P39086 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GRIK1P39086 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GRIK1P39086 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GRIK1P39086 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.58■□□□□ 0.89
GRIK1P39086 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GRIK1P39086 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
GRIK1P39086 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GRIK1P39086 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.58■□□□□ 0.89
GRIK1P39086 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.58■□□□□ 0.89
GRIK1P39086 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.58■□□□□ 0.89
GRIK1P39086 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GRIK1P39086 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms