Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.42■■□□□ 1.02
HOXC8P31273 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
HOXC8P31273 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HOXC8P31273 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.42■■□□□ 1.02
HOXC8P31273 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC8P31273 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
HOXC8P31273 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.41■■□□□ 1.02
HOXC8P31273 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.41■■□□□ 1.02
HOXC8P31273 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
HOXC8P31273 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.41■■□□□ 1.02
HOXC8P31273 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC8P31273 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HOXC8P31273 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC8P31273 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC8P31273 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC8P31273 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HOXC8P31273 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
HOXC8P31273 AC007375.3-201ENST00000600936 2314 ntBASIC21.41■■□□□ 1.02
HOXC8P31273 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
HOXC8P31273 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC8P31273 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HOXC8P31273 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
HOXC8P31273 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
HOXC8P31273 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC8P31273 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.4■■□□□ 1.02
HOXC8P31273 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC8P31273 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC8P31273 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
HOXC8P31273 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.4■■□□□ 1.02
HOXC8P31273 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC8P31273 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.4■■□□□ 1.02
HOXC8P31273 AC087388.1-201ENST00000571370 1112 ntBASIC21.4■■□□□ 1.02
HOXC8P31273 AC139887.4-201ENST00000607877 719 ntBASIC21.4■■□□□ 1.02
HOXC8P31273 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.4■■□□□ 1.02
HOXC8P31273 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
HOXC8P31273 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.4■■□□□ 1.02
HOXC8P31273 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC8P31273 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HOXC8P31273 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.39■■□□□ 1.02
HOXC8P31273 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HOXC8P31273 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.39■■□□□ 1.02
HOXC8P31273 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HOXC8P31273 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.39■■□□□ 1.01
HOXC8P31273 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.39■■□□□ 1.01
HOXC8P31273 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.39■■□□□ 1.01
HOXC8P31273 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HOXC8P31273 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
HOXC8P31273 RNF152P1-201ENST00000397754 604 ntBASIC21.39■■□□□ 1.01
HOXC8P31273 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.39■■□□□ 1.01
HOXC8P31273 YBX1P2-201ENST00000489612 999 ntBASIC21.39■■□□□ 1.01
HOXC8P31273 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.39■■□□□ 1.01
HOXC8P31273 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
HOXC8P31273 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
HOXC8P31273 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
HOXC8P31273 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HOXC8P31273 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.39■■□□□ 1.01
HOXC8P31273 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HOXC8P31273 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
HOXC8P31273 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.38■■□□□ 1.01
HOXC8P31273 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.38■■□□□ 1.01
HOXC8P31273 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.38■■□□□ 1.01
HOXC8P31273 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
HOXC8P31273 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC8P31273 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
HOXC8P31273 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC8P31273 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC8P31273 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.38■■□□□ 1.01
HOXC8P31273 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.38■■□□□ 1.01
HOXC8P31273 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HOXC8P31273 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.38■■□□□ 1.01
HOXC8P31273 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC8P31273 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC8P31273 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
HOXC8P31273 AC141257.4-201ENST00000634557 245 ntBASIC21.38■■□□□ 1.01
HOXC8P31273 AC136944.6-201ENST00000634818 245 ntBASIC21.38■■□□□ 1.01
HOXC8P31273 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC8P31273 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC8P31273 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC8P31273 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HOXC8P31273 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HOXC8P31273 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC8P31273 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
HOXC8P31273 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC8P31273 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.37■■□□□ 1.01
HOXC8P31273 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
HOXC8P31273 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.37■■□□□ 1.01
HOXC8P31273 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC8P31273 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC8P31273 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC8P31273 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC8P31273 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.37■■□□□ 1.01
HOXC8P31273 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.37■■□□□ 1.01
HOXC8P31273 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
HOXC8P31273 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
HOXC8P31273 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.37■■□□□ 1.01
HOXC8P31273 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC8P31273 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.37■■□□□ 1.01
HOXC8P31273 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
HOXC8P31273 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC8P31273 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms