Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD40P25942 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD40P25942 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD40P25942 MMP23A-201ENST00000234610 1017 ntBASIC16.87■□□□□ 0.29
CD40P25942 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CD40P25942 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD40P25942 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD40P25942 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.87■□□□□ 0.29
CD40P25942 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CD40P25942 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CD40P25942 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.87■□□□□ 0.29
CD40P25942 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD40P25942 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD40P25942 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.87■□□□□ 0.29
CD40P25942 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD40P25942 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.87■□□□□ 0.29
CD40P25942 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.86■□□□□ 0.29
CD40P25942 FSCN1P1-201ENST00000568912 1481 ntBASIC16.86■□□□□ 0.29
CD40P25942 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CD40P25942 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CD40P25942 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CD40P25942 AL157384.1-201ENST00000445995 2473 ntBASIC16.86■□□□□ 0.29
CD40P25942 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CD40P25942 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 AC004980.1-204ENST00000429707 299 ntBASIC16.86■□□□□ 0.29
CD40P25942 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.86■□□□□ 0.29
CD40P25942 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.86■□□□□ 0.29
CD40P25942 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.86■□□□□ 0.29
CD40P25942 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.86■□□□□ 0.29
CD40P25942 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.86■□□□□ 0.29
CD40P25942 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.86■□□□□ 0.29
CD40P25942 AC133561.5-201ENST00000635547 218 ntBASIC16.86■□□□□ 0.29
CD40P25942 HLA-A-209ENST00000638375 975 ntBASIC16.86■□□□□ 0.29
CD40P25942 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CD40P25942 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
CD40P25942 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 AC079598.2-202ENST00000546624 1451 ntBASIC16.86■□□□□ 0.29
CD40P25942 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.86■□□□□ 0.29
CD40P25942 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD40P25942 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CD40P25942 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CD40P25942 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.85■□□□□ 0.29
CD40P25942 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.85■□□□□ 0.29
CD40P25942 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.85■□□□□ 0.29
CD40P25942 AP000525.1-201ENST00000608286 694 ntBASIC16.85■□□□□ 0.29
CD40P25942 MIR6786-201ENST00000616843 113 ntBASIC16.85■□□□□ 0.29
CD40P25942 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CD40P25942 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CD40P25942 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CD40P25942 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CD40P25942 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.84■□□□□ 0.29
CD40P25942 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.84■□□□□ 0.29
CD40P25942 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.84■□□□□ 0.29
CD40P25942 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.84■□□□□ 0.29
CD40P25942 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.84■□□□□ 0.29
CD40P25942 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.84■□□□□ 0.29
CD40P25942 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.84■□□□□ 0.29
CD40P25942 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.84■□□□□ 0.29
CD40P25942 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CD40P25942 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CD40P25942 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms