Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.09■□□□□ 0.49
NR4A1P22736 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.09■□□□□ 0.49
NR4A1P22736 AC090192.1-201ENST00000517740 490 ntBASIC18.09■□□□□ 0.49
NR4A1P22736 DUX4L16-201ENST00000555130 1264 ntBASIC18.09■□□□□ 0.49
NR4A1P22736 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.09■□□□□ 0.49
NR4A1P22736 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.09■□□□□ 0.49
NR4A1P22736 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NR4A1P22736 AC010536.3-201ENST00000620306 533 ntBASIC18.09■□□□□ 0.49
NR4A1P22736 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR4A1P22736 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NR4A1P22736 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
NR4A1P22736 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NR4A1P22736 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR4A1P22736 AC090340.1-201ENST00000620778 4980 ntBASIC18.09■□□□□ 0.49
NR4A1P22736 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR4A1P22736 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NR4A1P22736 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR4A1P22736 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NR4A1P22736 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.09■□□□□ 0.49
NR4A1P22736 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.09■□□□□ 0.49
NR4A1P22736 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR4A1P22736 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.09■□□□□ 0.49
NR4A1P22736 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NR4A1P22736 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NR4A1P22736 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NR4A1P22736 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NR4A1P22736 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.08■□□□□ 0.49
NR4A1P22736 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.08■□□□□ 0.48
NR4A1P22736 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.08■□□□□ 0.48
NR4A1P22736 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
NR4A1P22736 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR4A1P22736 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.08■□□□□ 0.48
NR4A1P22736 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.08■□□□□ 0.48
NR4A1P22736 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.08■□□□□ 0.48
NR4A1P22736 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR4A1P22736 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR4A1P22736 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR4A1P22736 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.08■□□□□ 0.48
NR4A1P22736 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NR4A1P22736 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NR4A1P22736 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NR4A1P22736 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR4A1P22736 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR4A1P22736 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
NR4A1P22736 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NR4A1P22736 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.08■□□□□ 0.48
NR4A1P22736 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
NR4A1P22736 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 AL138781.2-201ENST00000617896 1843 ntBASIC18.07■□□□□ 0.48
NR4A1P22736 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.07■□□□□ 0.48
NR4A1P22736 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NR4A1P22736 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
NR4A1P22736 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
NR4A1P22736 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NR4A1P22736 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 AC026185.1-201ENST00000445748 174 ntBASIC18.07■□□□□ 0.48
NR4A1P22736 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NR4A1P22736 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.07■□□□□ 0.48
NR4A1P22736 RAP2CP1-201ENST00000605103 478 ntBASIC18.07■□□□□ 0.48
NR4A1P22736 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.07■□□□□ 0.48
NR4A1P22736 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
NR4A1P22736 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
NR4A1P22736 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NR4A1P22736 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.07■□□□□ 0.48
NR4A1P22736 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
NR4A1P22736 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NR4A1P22736 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.06■□□□□ 0.48
NR4A1P22736 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR4A1P22736 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NR4A1P22736 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.06■□□□□ 0.48
NR4A1P22736 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR4A1P22736 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NR4A1P22736 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NR4A1P22736 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR4A1P22736 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NR4A1P22736 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NR4A1P22736 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NR4A1P22736 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NR4A1P22736 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.06■□□□□ 0.48
NR4A1P22736 TERF1P5-201ENST00000477545 1207 ntBASIC18.06■□□□□ 0.48
NR4A1P22736 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.06■□□□□ 0.48
NR4A1P22736 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms