Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.89■□□□□ 0.77
NFKB1P19838 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.89■□□□□ 0.77
NFKB1P19838 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NFKB1P19838 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.89■□□□□ 0.77
NFKB1P19838 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NFKB1P19838 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.89■□□□□ 0.77
NFKB1P19838 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NFKB1P19838 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.89■□□□□ 0.77
NFKB1P19838 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.89■□□□□ 0.77
NFKB1P19838 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NFKB1P19838 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NFKB1P19838 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NFKB1P19838 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 AC005332.7-201ENST00000614046 2005 ntBASIC19.88■□□□□ 0.77
NFKB1P19838 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
NFKB1P19838 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.88■□□□□ 0.77
NFKB1P19838 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.88■□□□□ 0.77
NFKB1P19838 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
NFKB1P19838 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NFKB1P19838 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NFKB1P19838 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
NFKB1P19838 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.88■□□□□ 0.77
NFKB1P19838 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
NFKB1P19838 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
NFKB1P19838 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NFKB1P19838 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NFKB1P19838 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NFKB1P19838 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
NFKB1P19838 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NFKB1P19838 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NFKB1P19838 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NFKB1P19838 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NFKB1P19838 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
NFKB1P19838 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.87■□□□□ 0.77
NFKB1P19838 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
NFKB1P19838 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NFKB1P19838 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NFKB1P19838 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.87■□□□□ 0.77
NFKB1P19838 YBX1P10-201ENST00000444752 975 ntBASIC19.87■□□□□ 0.77
NFKB1P19838 AC026366.1-201ENST00000488803 879 ntBASIC19.87■□□□□ 0.77
NFKB1P19838 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.87■□□□□ 0.77
NFKB1P19838 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.87■□□□□ 0.77
NFKB1P19838 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
NFKB1P19838 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.87■□□□□ 0.77
NFKB1P19838 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NFKB1P19838 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
NFKB1P19838 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NFKB1P19838 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.86■□□□□ 0.77
NFKB1P19838 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.86■□□□□ 0.77
NFKB1P19838 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NFKB1P19838 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NFKB1P19838 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.85■□□□□ 0.77
NFKB1P19838 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
NFKB1P19838 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.85■□□□□ 0.77
NFKB1P19838 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NFKB1P19838 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NFKB1P19838 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.85■□□□□ 0.77
NFKB1P19838 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms