Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.33■□□□□ 0.85
HMGA1P17096 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
HMGA1P17096 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
HMGA1P17096 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.33■□□□□ 0.85
HMGA1P17096 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.33■□□□□ 0.85
HMGA1P17096 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMGA1P17096 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.33■□□□□ 0.85
HMGA1P17096 SLC25A3P1-201ENST00000443844 931 ntBASIC20.33■□□□□ 0.85
HMGA1P17096 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.33■□□□□ 0.85
HMGA1P17096 EGLN1P1-201ENST00000531623 762 ntBASIC20.33■□□□□ 0.85
HMGA1P17096 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.33■□□□□ 0.85
HMGA1P17096 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMGA1P17096 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.33■□□□□ 0.84
HMGA1P17096 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.33■□□□□ 0.84
HMGA1P17096 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGA1P17096 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.33■□□□□ 0.84
HMGA1P17096 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGA1P17096 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
HMGA1P17096 AC096733.2-201ENST00000609937 1394 ntBASIC20.33■□□□□ 0.84
HMGA1P17096 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
HMGA1P17096 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.32■□□□□ 0.84
HMGA1P17096 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGA1P17096 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGA1P17096 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGA1P17096 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGA1P17096 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGA1P17096 TERF1P1-201ENST00000311003 1181 ntBASIC20.32■□□□□ 0.84
HMGA1P17096 FAM207BP-201ENST00000447172 505 ntBASIC20.32■□□□□ 0.84
HMGA1P17096 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.32■□□□□ 0.84
HMGA1P17096 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.32■□□□□ 0.84
HMGA1P17096 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
HMGA1P17096 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGA1P17096 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGA1P17096 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HMGA1P17096 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
HMGA1P17096 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGA1P17096 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.32■□□□□ 0.84
HMGA1P17096 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGA1P17096 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGA1P17096 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA1P17096 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA1P17096 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA1P17096 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA1P17096 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA1P17096 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HMGA1P17096 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA1P17096 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.31■□□□□ 0.84
HMGA1P17096 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA1P17096 INGX-201ENST00000359239 846 ntBASIC20.31■□□□□ 0.84
HMGA1P17096 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HMGA1P17096 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HMGA1P17096 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.31■□□□□ 0.84
HMGA1P17096 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.31■□□□□ 0.84
HMGA1P17096 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.31■□□□□ 0.84
HMGA1P17096 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.31■□□□□ 0.84
HMGA1P17096 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.31■□□□□ 0.84
HMGA1P17096 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HMGA1P17096 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.31■□□□□ 0.84
HMGA1P17096 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.31■□□□□ 0.84
HMGA1P17096 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HMGA1P17096 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA1P17096 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA1P17096 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HMGA1P17096 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA1P17096 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA1P17096 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HMGA1P17096 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HMGA1P17096 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA1P17096 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HMGA1P17096 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA1P17096 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA1P17096 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA1P17096 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA1P17096 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA1P17096 TCF3P1-201ENST00000423021 1937 ntBASIC20.3■□□□□ 0.84
HMGA1P17096 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.3■□□□□ 0.84
HMGA1P17096 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.3■□□□□ 0.84
HMGA1P17096 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.3■□□□□ 0.84
HMGA1P17096 MFAP1P1-201ENST00000442257 1255 ntBASIC20.3■□□□□ 0.84
HMGA1P17096 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
HMGA1P17096 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.3■□□□□ 0.84
HMGA1P17096 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA1P17096 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA1P17096 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.3■□□□□ 0.84
HMGA1P17096 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HMGA1P17096 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA1P17096 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA1P17096 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA1P17096 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA1P17096 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA1P17096 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA1P17096 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA1P17096 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA1P17096 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGA1P17096 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA1P17096 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGA1P17096 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGA1P17096 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGA1P17096 KRT18P57-201ENST00000443599 1254 ntBASIC20.29■□□□□ 0.84
HMGA1P17096 ECEL1P2-202ENST00000465689 757 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms