Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.84
H2AFXP16104 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H2AFXP16104 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
H2AFXP16104 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
H2AFXP16104 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H2AFXP16104 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.33■□□□□ 0.84
H2AFXP16104 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.33■□□□□ 0.84
H2AFXP16104 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H2AFXP16104 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
H2AFXP16104 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.32■□□□□ 0.84
H2AFXP16104 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.32■□□□□ 0.84
H2AFXP16104 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.32■□□□□ 0.84
H2AFXP16104 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
H2AFXP16104 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H2AFXP16104 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.31■□□□□ 0.84
H2AFXP16104 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
H2AFXP16104 SIRPAP1-201ENST00000448467 1770 ntBASIC20.31■□□□□ 0.84
H2AFXP16104 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.31■□□□□ 0.84
H2AFXP16104 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
H2AFXP16104 PCDHA12-202ENST00000613593 2588 ntBASIC20.31■□□□□ 0.84
H2AFXP16104 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.31■□□□□ 0.84
H2AFXP16104 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.31■□□□□ 0.84
H2AFXP16104 UNC93B8-201ENST00000511903 705 ntBASIC20.31■□□□□ 0.84
H2AFXP16104 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.31■□□□□ 0.84
H2AFXP16104 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
H2AFXP16104 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
H2AFXP16104 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.31■□□□□ 0.84
H2AFXP16104 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.31■□□□□ 0.84
H2AFXP16104 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC20.31■□□□□ 0.84
H2AFXP16104 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.31■□□□□ 0.84
H2AFXP16104 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.31■□□□□ 0.84
H2AFXP16104 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
H2AFXP16104 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.3■□□□□ 0.84
H2AFXP16104 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.3■□□□□ 0.84
H2AFXP16104 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
H2AFXP16104 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.3■□□□□ 0.84
H2AFXP16104 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
H2AFXP16104 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.3■□□□□ 0.84
H2AFXP16104 AC020763.4-201ENST00000623414 4170 ntBASIC20.3■□□□□ 0.84
H2AFXP16104 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.3■□□□□ 0.84
H2AFXP16104 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.3■□□□□ 0.84
H2AFXP16104 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.3■□□□□ 0.84
H2AFXP16104 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
H2AFXP16104 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
H2AFXP16104 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.3■□□□□ 0.84
H2AFXP16104 AC239859.2-201ENST00000444165 318 ntBASIC20.3■□□□□ 0.84
H2AFXP16104 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.3■□□□□ 0.84
H2AFXP16104 FAM21FP-204ENST00000608637 956 ntBASIC20.3■□□□□ 0.84
H2AFXP16104 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
H2AFXP16104 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
H2AFXP16104 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.3■□□□□ 0.84
H2AFXP16104 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 AC126763.1-201ENST00000552015 2118 ntBASIC20.3■□□□□ 0.84
H2AFXP16104 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
H2AFXP16104 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
H2AFXP16104 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms