Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBCP0CG48 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.13■□□□□ 0.33
UBCP0CG48 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.13■□□□□ 0.33
UBCP0CG48 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBCP0CG48 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBCP0CG48 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBCP0CG48 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.13■□□□□ 0.33
UBCP0CG48 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.13■□□□□ 0.33
UBCP0CG48 AL512625.2-201ENST00000417533 625 ntBASIC17.13■□□□□ 0.33
UBCP0CG48 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBCP0CG48 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBCP0CG48 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBCP0CG48 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBCP0CG48 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.13■□□□□ 0.33
UBCP0CG48 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UBCP0CG48 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.13■□□□□ 0.33
UBCP0CG48 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBCP0CG48 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBCP0CG48 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UBCP0CG48 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
UBCP0CG48 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.12■□□□□ 0.33
UBCP0CG48 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
UBCP0CG48 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.12■□□□□ 0.33
UBCP0CG48 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.12■□□□□ 0.33
UBCP0CG48 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.12■□□□□ 0.33
UBCP0CG48 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.12■□□□□ 0.33
UBCP0CG48 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
UBCP0CG48 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
UBCP0CG48 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
UBCP0CG48 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBCP0CG48 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
UBCP0CG48 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.11■□□□□ 0.33
UBCP0CG48 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UBCP0CG48 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
UBCP0CG48 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.11■□□□□ 0.33
UBCP0CG48 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBCP0CG48 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.11■□□□□ 0.33
UBCP0CG48 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.11■□□□□ 0.33
UBCP0CG48 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.11■□□□□ 0.33
UBCP0CG48 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
UBCP0CG48 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 LINC01465-201ENST00000408887 1940 ntBASIC17.11■□□□□ 0.33
UBCP0CG48 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.11■□□□□ 0.33
UBCP0CG48 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBCP0CG48 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.11■□□□□ 0.33
UBCP0CG48 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.1■□□□□ 0.33
UBCP0CG48 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.1■□□□□ 0.33
UBCP0CG48 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.1■□□□□ 0.33
UBCP0CG48 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.1■□□□□ 0.33
UBCP0CG48 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.1■□□□□ 0.33
UBCP0CG48 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.1■□□□□ 0.33
UBCP0CG48 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBCP0CG48 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.1■□□□□ 0.33
UBCP0CG48 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBCP0CG48 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
UBCP0CG48 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms