Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD48P09326 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CD48P09326 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CD48P09326 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CD48P09326 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CD48P09326 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD48P09326 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.26■□□□□ 0.83
CD48P09326 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CD48P09326 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.26■□□□□ 0.83
CD48P09326 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CD48P09326 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.26■□□□□ 0.83
CD48P09326 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.26■□□□□ 0.83
CD48P09326 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD48P09326 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD48P09326 AC098818.2-201ENST00000564925 2320 ntBASIC20.26■□□□□ 0.83
CD48P09326 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD48P09326 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CD48P09326 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD48P09326 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.26■□□□□ 0.83
CD48P09326 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CD48P09326 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CD48P09326 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CD48P09326 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CD48P09326 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.25■□□□□ 0.83
CD48P09326 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.25■□□□□ 0.83
CD48P09326 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD48P09326 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.25■□□□□ 0.83
CD48P09326 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD48P09326 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CD48P09326 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD48P09326 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD48P09326 AP006587.1-201ENST00000534129 1502 ntBASIC20.25■□□□□ 0.83
CD48P09326 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.25■□□□□ 0.83
CD48P09326 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD48P09326 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.25■□□□□ 0.83
CD48P09326 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD48P09326 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CD48P09326 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD48P09326 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD48P09326 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.25■□□□□ 0.83
CD48P09326 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CD48P09326 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CD48P09326 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CD48P09326 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
CD48P09326 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.24■□□□□ 0.83
CD48P09326 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.24■□□□□ 0.83
CD48P09326 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.24■□□□□ 0.83
CD48P09326 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CD48P09326 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.24■□□□□ 0.83
CD48P09326 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.24■□□□□ 0.83
CD48P09326 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.24■□□□□ 0.83
CD48P09326 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.24■□□□□ 0.83
CD48P09326 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD48P09326 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CD48P09326 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.23■□□□□ 0.83
CD48P09326 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD48P09326 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD48P09326 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD48P09326 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.23■□□□□ 0.83
CD48P09326 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.23■□□□□ 0.83
CD48P09326 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD48P09326 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
CD48P09326 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.23■□□□□ 0.83
CD48P09326 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD48P09326 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CD48P09326 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.23■□□□□ 0.83
CD48P09326 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD48P09326 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD48P09326 AL121829.2-201ENST00000620908 328 ntBASIC20.23■□□□□ 0.83
CD48P09326 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD48P09326 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.23■□□□□ 0.83
CD48P09326 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD48P09326 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD48P09326 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD48P09326 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 AP000974.1-201ENST00000623909 2387 ntBASIC20.22■□□□□ 0.83
CD48P09326 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CD48P09326 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.22■□□□□ 0.83
CD48P09326 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.22■□□□□ 0.83
CD48P09326 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD48P09326 POM121L13P-201ENST00000422362 380 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms