Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP2P08253 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.72■□□□□ 0.75
MMP2P08253 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
MMP2P08253 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP2P08253 AC116562.4-201ENST00000641316 2276 ntBASIC19.72■□□□□ 0.75
MMP2P08253 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
MMP2P08253 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP2P08253 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MMP2P08253 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MMP2P08253 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP2P08253 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP2P08253 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MMP2P08253 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP2P08253 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.71■□□□□ 0.75
MMP2P08253 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP2P08253 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MMP2P08253 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP2P08253 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP2P08253 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
MMP2P08253 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.71■□□□□ 0.75
MMP2P08253 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.71■□□□□ 0.75
MMP2P08253 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP2P08253 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.71■□□□□ 0.75
MMP2P08253 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP2P08253 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MMP2P08253 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
MMP2P08253 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP2P08253 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP2P08253 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP2P08253 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP2P08253 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MMP2P08253 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP2P08253 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.7■□□□□ 0.74
MMP2P08253 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP2P08253 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP2P08253 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MMP2P08253 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MMP2P08253 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MMP2P08253 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MMP2P08253 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.7■□□□□ 0.74
MMP2P08253 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MMP2P08253 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP2P08253 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP2P08253 KRT16P5-201ENST00000455284 522 ntBASIC19.7■□□□□ 0.74
MMP2P08253 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP2P08253 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.7■□□□□ 0.74
MMP2P08253 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP2P08253 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP2P08253 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP2P08253 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MMP2P08253 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP2P08253 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP2P08253 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP2P08253 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP2P08253 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP2P08253 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
MMP2P08253 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.7■□□□□ 0.74
MMP2P08253 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MMP2P08253 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MMP2P08253 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.69■□□□□ 0.74
MMP2P08253 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP2P08253 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP2P08253 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP2P08253 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MMP2P08253 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP2P08253 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP2P08253 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP2P08253 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP2P08253 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
MMP2P08253 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
MMP2P08253 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP2P08253 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP2P08253 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP2P08253 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP2P08253 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
MMP2P08253 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP2P08253 C1QL1P1-201ENST00000568105 661 ntBASIC19.69■□□□□ 0.74
MMP2P08253 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP2P08253 AC004264.1-201ENST00000608354 794 ntBASIC19.69■□□□□ 0.74
MMP2P08253 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.69■□□□□ 0.74
MMP2P08253 AC007952.6-201ENST00000573168 2673 ntBASIC19.69■□□□□ 0.74
MMP2P08253 AC003957.1-201ENST00000625108 2673 ntBASIC19.69■□□□□ 0.74
MMP2P08253 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP2P08253 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP2P08253 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
MMP2P08253 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
MMP2P08253 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP2P08253 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.68■□□□□ 0.74
MMP2P08253 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.68■□□□□ 0.74
MMP2P08253 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.68■□□□□ 0.74
MMP2P08253 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
MMP2P08253 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.68■□□□□ 0.74
MMP2P08253 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MMP2P08253 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.68■□□□□ 0.74
MMP2P08253 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.68■□□□□ 0.74
MMP2P08253 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms