Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC009237.14-201ENST00000609975 1594 ntBASIC23.07■■□□□ 1.28
HLA-DOAP06340 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DOAP06340 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DOAP06340 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DOAP06340 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DOAP06340 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DOAP06340 AC005521.1-201ENST00000393351 872 ntBASIC23.07■■□□□ 1.28
HLA-DOAP06340 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.07■■□□□ 1.28
HLA-DOAP06340 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.07■■□□□ 1.28
HLA-DOAP06340 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC23.07■■□□□ 1.28
HLA-DOAP06340 FAM207BP-201ENST00000447172 505 ntBASIC23.07■■□□□ 1.28
HLA-DOAP06340 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.07■■□□□ 1.28
HLA-DOAP06340 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
HLA-DOAP06340 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.07■■□□□ 1.28
HLA-DOAP06340 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
HLA-DOAP06340 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DOAP06340 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HLA-DOAP06340 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DOAP06340 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
HLA-DOAP06340 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DOAP06340 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.06■■□□□ 1.28
HLA-DOAP06340 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DOAP06340 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.06■■□□□ 1.28
HLA-DOAP06340 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.06■■□□□ 1.28
HLA-DOAP06340 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DOAP06340 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
HLA-DOAP06340 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DOAP06340 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DOAP06340 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DOAP06340 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.06■■□□□ 1.28
HLA-DOAP06340 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
HLA-DOAP06340 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DOAP06340 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DOAP06340 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.05■■□□□ 1.28
HLA-DOAP06340 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.05■■□□□ 1.28
HLA-DOAP06340 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DOAP06340 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DOAP06340 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DOAP06340 AL137013.1-201ENST00000432946 1228 ntBASIC23.05■■□□□ 1.28
HLA-DOAP06340 SLC25A3P1-201ENST00000443844 931 ntBASIC23.05■■□□□ 1.28
HLA-DOAP06340 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.05■■□□□ 1.28
HLA-DOAP06340 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.05■■□□□ 1.28
HLA-DOAP06340 EGLN1P1-201ENST00000531623 762 ntBASIC23.05■■□□□ 1.28
HLA-DOAP06340 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC23.05■■□□□ 1.28
HLA-DOAP06340 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DOAP06340 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DOAP06340 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
HLA-DOAP06340 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.05■■□□□ 1.28
HLA-DOAP06340 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DOAP06340 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
HLA-DOAP06340 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
HLA-DOAP06340 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HLA-DOAP06340 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HLA-DOAP06340 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
HLA-DOAP06340 TSPY14P-201ENST00000303979 915 ntBASIC23.04■■□□□ 1.28
HLA-DOAP06340 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.04■■□□□ 1.28
HLA-DOAP06340 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
HLA-DOAP06340 AC008040.2-201ENST00000461049 708 ntBASIC23.04■■□□□ 1.28
HLA-DOAP06340 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.04■■□□□ 1.28
HLA-DOAP06340 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.04■■□□□ 1.28
HLA-DOAP06340 Z85996.1-201ENST00000494644 937 ntBASIC23.04■■□□□ 1.28
HLA-DOAP06340 AL160286.2-201ENST00000567150 934 ntBASIC23.04■■□□□ 1.28
HLA-DOAP06340 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
HLA-DOAP06340 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
HLA-DOAP06340 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HLA-DOAP06340 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
HLA-DOAP06340 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
HLA-DOAP06340 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
HLA-DOAP06340 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HLA-DOAP06340 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
HLA-DOAP06340 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.03■■□□□ 1.28
HLA-DOAP06340 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.03■■□□□ 1.28
HLA-DOAP06340 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.03■■□□□ 1.28
HLA-DOAP06340 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.03■■□□□ 1.28
HLA-DOAP06340 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
HLA-DOAP06340 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
HLA-DOAP06340 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC23.03■■□□□ 1.28
HLA-DOAP06340 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
HLA-DOAP06340 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
HLA-DOAP06340 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.02■■□□□ 1.28
HLA-DOAP06340 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 TERF1P1-201ENST00000311003 1181 ntBASIC23.02■■□□□ 1.28
HLA-DOAP06340 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 MFAP1P1-201ENST00000442257 1255 ntBASIC23.02■■□□□ 1.28
HLA-DOAP06340 AC091390.4-202ENST00000476426 537 ntBASIC23.02■■□□□ 1.28
HLA-DOAP06340 AC128688.1-201ENST00000487626 519 ntBASIC23.02■■□□□ 1.28
HLA-DOAP06340 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.02■■□□□ 1.28
HLA-DOAP06340 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
HLA-DOAP06340 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
HLA-DOAP06340 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
HLA-DOAP06340 AL391422.3-201ENST00000603791 2761 ntBASIC23.02■■□□□ 1.28
HLA-DOAP06340 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms