Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
MT-ND3P03897 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MT-ND3P03897 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-ND3P03897 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.87■□□□□ 0.77
MT-ND3P03897 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.87■□□□□ 0.77
MT-ND3P03897 KRT16P6-202ENST00000425692 1426 ntBASIC19.87■□□□□ 0.77
MT-ND3P03897 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-ND3P03897 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
MT-ND3P03897 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
MT-ND3P03897 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-ND3P03897 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-ND3P03897 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MT-ND3P03897 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MT-ND3P03897 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-ND3P03897 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-ND3P03897 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.87■□□□□ 0.77
MT-ND3P03897 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-ND3P03897 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.87■□□□□ 0.77
MT-ND3P03897 AC092118.2-201ENST00000613495 667 ntBASIC19.87■□□□□ 0.77
MT-ND3P03897 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-ND3P03897 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-ND3P03897 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.87■□□□□ 0.77
MT-ND3P03897 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.87■□□□□ 0.77
MT-ND3P03897 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-ND3P03897 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MT-ND3P03897 CYP21A1P-202ENST00000354927 1481 ntBASIC19.86■□□□□ 0.77
MT-ND3P03897 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MT-ND3P03897 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND3P03897 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.86■□□□□ 0.77
MT-ND3P03897 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.86■□□□□ 0.77
MT-ND3P03897 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND3P03897 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.86■□□□□ 0.77
MT-ND3P03897 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND3P03897 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND3P03897 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.86■□□□□ 0.77
MT-ND3P03897 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.86■□□□□ 0.77
MT-ND3P03897 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.86■□□□□ 0.77
MT-ND3P03897 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.86■□□□□ 0.77
MT-ND3P03897 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND3P03897 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.86■□□□□ 0.77
MT-ND3P03897 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND3P03897 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND3P03897 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-ND3P03897 PTBP1P-201ENST00000554374 1601 ntBASIC19.86■□□□□ 0.77
MT-ND3P03897 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.86■□□□□ 0.77
MT-ND3P03897 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
MT-ND3P03897 AC093503.3-201ENST00000624917 2352 ntBASIC19.86■□□□□ 0.77
MT-ND3P03897 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
MT-ND3P03897 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.85■□□□□ 0.77
MT-ND3P03897 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.85■□□□□ 0.77
MT-ND3P03897 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.85■□□□□ 0.77
MT-ND3P03897 AC016405.3-201ENST00000607710 860 ntBASIC19.85■□□□□ 0.77
MT-ND3P03897 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.85■□□□□ 0.77
MT-ND3P03897 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.85■□□□□ 0.77
MT-ND3P03897 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
MT-ND3P03897 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.85■□□□□ 0.77
MT-ND3P03897 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MT-ND3P03897 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND3P03897 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.84■□□□□ 0.77
MT-ND3P03897 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.84■□□□□ 0.77
MT-ND3P03897 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND3P03897 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
MT-ND3P03897 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
MT-ND3P03897 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND3P03897 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
MT-ND3P03897 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND3P03897 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.84■□□□□ 0.77
MT-ND3P03897 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.84■□□□□ 0.77
MT-ND3P03897 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.84■□□□□ 0.77
MT-ND3P03897 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.84■□□□□ 0.77
MT-ND3P03897 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
MT-ND3P03897 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MT-ND3P03897 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
MT-ND3P03897 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms