Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APOEP02649 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.47■□□□□ 0.87
APOEP02649 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APOEP02649 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APOEP02649 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
APOEP02649 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.47■□□□□ 0.87
APOEP02649 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.47■□□□□ 0.87
APOEP02649 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APOEP02649 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.47■□□□□ 0.87
APOEP02649 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.47■□□□□ 0.87
APOEP02649 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APOEP02649 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APOEP02649 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
APOEP02649 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.47■□□□□ 0.87
APOEP02649 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
APOEP02649 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.47■□□□□ 0.87
APOEP02649 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
APOEP02649 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.47■□□□□ 0.87
APOEP02649 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
APOEP02649 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.46■□□□□ 0.87
APOEP02649 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.46■□□□□ 0.87
APOEP02649 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
APOEP02649 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.46■□□□□ 0.87
APOEP02649 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.46■□□□□ 0.87
APOEP02649 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.46■□□□□ 0.87
APOEP02649 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
APOEP02649 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.46■□□□□ 0.87
APOEP02649 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.46■□□□□ 0.87
APOEP02649 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.46■□□□□ 0.87
APOEP02649 AC004264.1-201ENST00000608354 794 ntBASIC20.46■□□□□ 0.87
APOEP02649 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.46■□□□□ 0.87
APOEP02649 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
APOEP02649 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
APOEP02649 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.46■□□□□ 0.87
APOEP02649 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
APOEP02649 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APOEP02649 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APOEP02649 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
APOEP02649 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.45■□□□□ 0.86
APOEP02649 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APOEP02649 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.45■□□□□ 0.86
APOEP02649 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.45■□□□□ 0.86
APOEP02649 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
APOEP02649 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
APOEP02649 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.45■□□□□ 0.86
APOEP02649 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.45■□□□□ 0.86
APOEP02649 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
APOEP02649 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APOEP02649 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
APOEP02649 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
APOEP02649 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
APOEP02649 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
APOEP02649 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
APOEP02649 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.45■□□□□ 0.86
APOEP02649 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
APOEP02649 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
APOEP02649 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APOEP02649 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.44■□□□□ 0.86
APOEP02649 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APOEP02649 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
APOEP02649 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APOEP02649 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
APOEP02649 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.44■□□□□ 0.86
APOEP02649 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
APOEP02649 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.44■□□□□ 0.86
APOEP02649 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.44■□□□□ 0.86
APOEP02649 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.44■□□□□ 0.86
APOEP02649 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.44■□□□□ 0.86
APOEP02649 AP006294.2-201ENST00000641667 209 ntBASIC20.44■□□□□ 0.86
APOEP02649 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
APOEP02649 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
APOEP02649 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APOEP02649 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
APOEP02649 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.44■□□□□ 0.86
APOEP02649 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
APOEP02649 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
APOEP02649 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.43■□□□□ 0.86
APOEP02649 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOEP02649 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOEP02649 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOEP02649 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.43■□□□□ 0.86
APOEP02649 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOEP02649 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
APOEP02649 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.43■□□□□ 0.86
APOEP02649 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms