Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TOP3BO95985 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.01■□□□□ 0.79
TOP3BO95985 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
TOP3BO95985 AL049597.2-201ENST00000565575 961 ntBASIC20.01■□□□□ 0.79
TOP3BO95985 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TOP3BO95985 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TOP3BO95985 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.01■□□□□ 0.79
TOP3BO95985 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TOP3BO95985 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TOP3BO95985 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TOP3BO95985 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.01■□□□□ 0.79
TOP3BO95985 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
TOP3BO95985 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
TOP3BO95985 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TOP3BO95985 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20■□□□□ 0.79
TOP3BO95985 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP3BO95985 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20■□□□□ 0.79
TOP3BO95985 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TOP3BO95985 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20■□□□□ 0.79
TOP3BO95985 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP3BO95985 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20■□□□□ 0.79
TOP3BO95985 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TOP3BO95985 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TOP3BO95985 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20■□□□□ 0.79
TOP3BO95985 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20■□□□□ 0.79
TOP3BO95985 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20■□□□□ 0.79
TOP3BO95985 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP3BO95985 AC124016.1-201ENST00000609552 612 ntBASIC20■□□□□ 0.79
TOP3BO95985 AL589743.5-201ENST00000616611 1050 ntBASIC20■□□□□ 0.79
TOP3BO95985 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP3BO95985 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20■□□□□ 0.79
TOP3BO95985 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP3BO95985 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TOP3BO95985 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20■□□□□ 0.79
TOP3BO95985 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TOP3BO95985 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TOP3BO95985 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.99■□□□□ 0.79
TOP3BO95985 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP3BO95985 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP3BO95985 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TOP3BO95985 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TOP3BO95985 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TOP3BO95985 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP3BO95985 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
TOP3BO95985 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TOP3BO95985 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TOP3BO95985 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
TOP3BO95985 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TOP3BO95985 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TOP3BO95985 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.99■□□□□ 0.79
TOP3BO95985 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.99■□□□□ 0.79
TOP3BO95985 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.99■□□□□ 0.79
TOP3BO95985 AL353708.3-201ENST00000610272 989 ntBASIC19.99■□□□□ 0.79
TOP3BO95985 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.99■□□□□ 0.79
TOP3BO95985 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.99■□□□□ 0.79
TOP3BO95985 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TOP3BO95985 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
TOP3BO95985 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP3BO95985 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP3BO95985 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP3BO95985 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TOP3BO95985 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.99■□□□□ 0.79
TOP3BO95985 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.98■□□□□ 0.79
TOP3BO95985 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP3BO95985 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP3BO95985 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP3BO95985 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TOP3BO95985 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP3BO95985 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP3BO95985 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP3BO95985 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.98■□□□□ 0.79
TOP3BO95985 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.98■□□□□ 0.79
TOP3BO95985 MTDHP1-201ENST00000605323 784 ntBASIC19.98■□□□□ 0.79
TOP3BO95985 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP3BO95985 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TOP3BO95985 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.98■□□□□ 0.79
TOP3BO95985 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
TOP3BO95985 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.97■□□□□ 0.79
TOP3BO95985 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP3BO95985 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP3BO95985 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TOP3BO95985 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP3BO95985 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.97■□□□□ 0.79
TOP3BO95985 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.97■□□□□ 0.79
TOP3BO95985 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TOP3BO95985 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
TOP3BO95985 FAM21FP-204ENST00000608637 956 ntBASIC19.97■□□□□ 0.79
TOP3BO95985 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.97■□□□□ 0.79
TOP3BO95985 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TOP3BO95985 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TOP3BO95985 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TOP3BO95985 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP3BO95985 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.97■□□□□ 0.79
TOP3BO95985 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.97■□□□□ 0.79
TOP3BO95985 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
TOP3BO95985 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TOP3BO95985 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TOP3BO95985 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TOP3BO95985 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.97■□□□□ 0.79
TOP3BO95985 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms