Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX4O95219 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX4O95219 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.33■□□□□ 0.53
SNX4O95219 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNX4O95219 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.33■□□□□ 0.53
SNX4O95219 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.33■□□□□ 0.52
SNX4O95219 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX4O95219 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SNX4O95219 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX4O95219 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX4O95219 POM121L13P-201ENST00000422362 380 ntBASIC18.33■□□□□ 0.52
SNX4O95219 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX4O95219 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX4O95219 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.33■□□□□ 0.52
SNX4O95219 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.33■□□□□ 0.52
SNX4O95219 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SNX4O95219 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX4O95219 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX4O95219 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.33■□□□□ 0.52
SNX4O95219 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SNX4O95219 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX4O95219 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.33■□□□□ 0.52
SNX4O95219 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX4O95219 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX4O95219 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX4O95219 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SNX4O95219 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNX4O95219 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 KRT8P20-201ENST00000423953 1409 ntBASIC18.32■□□□□ 0.52
SNX4O95219 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.32■□□□□ 0.52
SNX4O95219 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX4O95219 AC128676.1-201ENST00000454392 318 ntBASIC18.32■□□□□ 0.52
SNX4O95219 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX4O95219 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SNX4O95219 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.32■□□□□ 0.52
SNX4O95219 AC120498.8-201ENST00000614275 531 ntBASIC18.32■□□□□ 0.52
SNX4O95219 AC006557.6-201ENST00000623071 864 ntBASIC18.32■□□□□ 0.52
SNX4O95219 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SNX4O95219 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX4O95219 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNX4O95219 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX4O95219 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.32■□□□□ 0.52
SNX4O95219 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SNX4O95219 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 AL031963.3-201ENST00000606441 850 ntBASIC18.31■□□□□ 0.52
SNX4O95219 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX4O95219 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX4O95219 AC004408.2-201ENST00000623613 2777 ntBASIC18.31■□□□□ 0.52
SNX4O95219 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX4O95219 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX4O95219 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX4O95219 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX4O95219 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX4O95219 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX4O95219 PTBP1P-201ENST00000554374 1601 ntBASIC18.31■□□□□ 0.52
SNX4O95219 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX4O95219 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX4O95219 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SNX4O95219 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX4O95219 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.3■□□□□ 0.52
SNX4O95219 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX4O95219 AC073648.6-201ENST00000641589 218 ntBASIC18.3■□□□□ 0.52
SNX4O95219 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SNX4O95219 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX4O95219 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX4O95219 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SNX4O95219 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX4O95219 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms