Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM3O75382 AL158047.1-201ENST00000445918 881 ntBASIC18.2■□□□□ 0.5
TRIM3O75382 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM3O75382 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 RPPH1-201ENST00000516869 333 ntBASIC18.2■□□□□ 0.5
TRIM3O75382 C1QBPP2-201ENST00000528754 825 ntBASIC18.2■□□□□ 0.5
TRIM3O75382 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM3O75382 AC066615.1-201ENST00000640911 628 ntBASIC18.2■□□□□ 0.5
TRIM3O75382 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TRIM3O75382 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRIM3O75382 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRIM3O75382 AL512408.1-201ENST00000569378 2000 ntBASIC18.2■□□□□ 0.5
TRIM3O75382 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM3O75382 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM3O75382 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM3O75382 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM3O75382 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM3O75382 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM3O75382 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM3O75382 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM3O75382 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM3O75382 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM3O75382 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM3O75382 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM3O75382 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM3O75382 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM3O75382 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM3O75382 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM3O75382 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM3O75382 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM3O75382 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM3O75382 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM3O75382 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM3O75382 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM3O75382 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM3O75382 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM3O75382 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 AL121829.2-201ENST00000620908 328 ntBASIC18.18■□□□□ 0.5
TRIM3O75382 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM3O75382 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 AC124283.5-201ENST00000624661 1809 ntBASIC18.18■□□□□ 0.5
TRIM3O75382 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 LETM1P2-201ENST00000597330 2178 ntBASIC18.18■□□□□ 0.5
TRIM3O75382 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM3O75382 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM3O75382 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM3O75382 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM3O75382 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM3O75382 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM3O75382 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM3O75382 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM3O75382 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM3O75382 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM3O75382 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM3O75382 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRIM3O75382 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TRIM3O75382 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM3O75382 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM3O75382 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM3O75382 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
TRIM3O75382 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRIM3O75382 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM3O75382 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms