Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
ZIC3O60481 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
ZIC3O60481 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.64■□□□□ 0.41
ZIC3O60481 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZIC3O60481 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC3O60481 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC3O60481 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC3O60481 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC3O60481 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.63■□□□□ 0.41
ZIC3O60481 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC3O60481 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC3O60481 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC3O60481 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC3O60481 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.63■□□□□ 0.41
ZIC3O60481 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.63■□□□□ 0.41
ZIC3O60481 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.63■□□□□ 0.41
ZIC3O60481 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
ZIC3O60481 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.63■□□□□ 0.41
ZIC3O60481 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.63■□□□□ 0.41
ZIC3O60481 AL445675.2-201ENST00000620291 557 ntBASIC17.63■□□□□ 0.41
ZIC3O60481 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.63■□□□□ 0.41
ZIC3O60481 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.63■□□□□ 0.41
ZIC3O60481 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.63■□□□□ 0.41
ZIC3O60481 CR392000.1-201ENST00000624770 1228 ntBASIC17.63■□□□□ 0.41
ZIC3O60481 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.63■□□□□ 0.41
ZIC3O60481 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.63■□□□□ 0.41
ZIC3O60481 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC3O60481 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.63■□□□□ 0.41
ZIC3O60481 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC3O60481 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZIC3O60481 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ZIC3O60481 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.63■□□□□ 0.41
ZIC3O60481 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ZIC3O60481 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ZIC3O60481 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ZIC3O60481 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.62■□□□□ 0.41
ZIC3O60481 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.62■□□□□ 0.41
ZIC3O60481 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.62■□□□□ 0.41
ZIC3O60481 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.62■□□□□ 0.41
ZIC3O60481 HLA-A-209ENST00000638375 975 ntBASIC17.62■□□□□ 0.41
ZIC3O60481 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.62■□□□□ 0.41
ZIC3O60481 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ZIC3O60481 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.62■□□□□ 0.41
ZIC3O60481 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZIC3O60481 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ZIC3O60481 AC125437.2-201ENST00000625180 2167 ntBASIC17.62■□□□□ 0.41
ZIC3O60481 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZIC3O60481 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.61■□□□□ 0.41
ZIC3O60481 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ZIC3O60481 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.61■□□□□ 0.41
ZIC3O60481 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZIC3O60481 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZIC3O60481 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZIC3O60481 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZIC3O60481 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.61■□□□□ 0.41
ZIC3O60481 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ZIC3O60481 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZIC3O60481 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ZIC3O60481 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ZIC3O60481 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZIC3O60481 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZIC3O60481 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZIC3O60481 KRT16P1-201ENST00000399124 1418 ntBASIC17.61■□□□□ 0.41
ZIC3O60481 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.61■□□□□ 0.41
ZIC3O60481 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZIC3O60481 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.61■□□□□ 0.41
ZIC3O60481 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ZIC3O60481 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
ZIC3O60481 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZIC3O60481 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.61■□□□□ 0.41
ZIC3O60481 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ZIC3O60481 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.6■□□□□ 0.41
ZIC3O60481 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.6■□□□□ 0.41
ZIC3O60481 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ZIC3O60481 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZIC3O60481 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.6■□□□□ 0.41
ZIC3O60481 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.6■□□□□ 0.41
ZIC3O60481 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms