Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.71■□□□□ 0.59
LCMT2O60294 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.71■□□□□ 0.59
LCMT2O60294 RNF165-205ENST00000588679 2904 ntBASIC18.71■□□□□ 0.59
LCMT2O60294 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LCMT2O60294 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LCMT2O60294 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.71■□□□□ 0.59
LCMT2O60294 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LCMT2O60294 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.71■□□□□ 0.59
LCMT2O60294 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LCMT2O60294 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.71■□□□□ 0.59
LCMT2O60294 TUBB8P6-201ENST00000436895 1288 ntBASIC18.71■□□□□ 0.59
LCMT2O60294 AL158047.1-201ENST00000445918 881 ntBASIC18.71■□□□□ 0.59
LCMT2O60294 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LCMT2O60294 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.71■□□□□ 0.59
LCMT2O60294 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.71■□□□□ 0.59
LCMT2O60294 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LCMT2O60294 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LCMT2O60294 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LCMT2O60294 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.71■□□□□ 0.59
LCMT2O60294 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LCMT2O60294 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LCMT2O60294 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LCMT2O60294 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LCMT2O60294 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LCMT2O60294 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LCMT2O60294 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.7■□□□□ 0.58
LCMT2O60294 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LCMT2O60294 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LCMT2O60294 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LCMT2O60294 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LCMT2O60294 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LCMT2O60294 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LCMT2O60294 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.7■□□□□ 0.58
LCMT2O60294 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
LCMT2O60294 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.7■□□□□ 0.58
LCMT2O60294 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.7■□□□□ 0.58
LCMT2O60294 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.7■□□□□ 0.58
LCMT2O60294 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.7■□□□□ 0.58
LCMT2O60294 FAM197Y4-202ENST00000622692 608 ntBASIC18.7■□□□□ 0.58
LCMT2O60294 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LCMT2O60294 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.7■□□□□ 0.58
LCMT2O60294 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LCMT2O60294 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LCMT2O60294 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LCMT2O60294 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LCMT2O60294 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
LCMT2O60294 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LCMT2O60294 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.69■□□□□ 0.58
LCMT2O60294 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
LCMT2O60294 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LCMT2O60294 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LCMT2O60294 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LCMT2O60294 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LCMT2O60294 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 KRT16P5-201ENST00000455284 522 ntBASIC18.69■□□□□ 0.58
LCMT2O60294 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.69■□□□□ 0.58
LCMT2O60294 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.69■□□□□ 0.58
LCMT2O60294 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.69■□□□□ 0.58
LCMT2O60294 AC004264.1-201ENST00000608354 794 ntBASIC18.69■□□□□ 0.58
LCMT2O60294 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.69■□□□□ 0.58
LCMT2O60294 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LCMT2O60294 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
LCMT2O60294 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LCMT2O60294 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LCMT2O60294 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LCMT2O60294 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.69■□□□□ 0.58
LCMT2O60294 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.68■□□□□ 0.58
LCMT2O60294 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.68■□□□□ 0.58
LCMT2O60294 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCMT2O60294 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCMT2O60294 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCMT2O60294 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCMT2O60294 KRT8P8-201ENST00000434750 1448 ntBASIC18.68■□□□□ 0.58
LCMT2O60294 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCMT2O60294 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LCMT2O60294 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.68■□□□□ 0.58
LCMT2O60294 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.68■□□□□ 0.58
LCMT2O60294 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.68■□□□□ 0.58
LCMT2O60294 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCMT2O60294 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LCMT2O60294 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.68■□□□□ 0.58
LCMT2O60294 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.68■□□□□ 0.58
LCMT2O60294 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.68■□□□□ 0.58
LCMT2O60294 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.68■□□□□ 0.58
LCMT2O60294 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.68■□□□□ 0.58
LCMT2O60294 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.68■□□□□ 0.58
LCMT2O60294 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.68■□□□□ 0.58
LCMT2O60294 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LCMT2O60294 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms