Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH7O60245 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.66■□□□□ 0.58
PCDH7O60245 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDH7O60245 AC142086.2-201ENST00000569753 217 ntBASIC18.66■□□□□ 0.58
PCDH7O60245 AL121906.2-201ENST00000621597 723 ntBASIC18.66■□□□□ 0.58
PCDH7O60245 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDH7O60245 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH7O60245 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 Z82202.1-201ENST00000623446 1880 ntBASIC18.66■□□□□ 0.58
PCDH7O60245 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDH7O60245 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PCDH7O60245 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH7O60245 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 RNF165-205ENST00000588679 2904 ntBASIC18.65■□□□□ 0.58
PCDH7O60245 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDH7O60245 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDH7O60245 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDH7O60245 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDH7O60245 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
PCDH7O60245 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDH7O60245 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH7O60245 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH7O60245 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH7O60245 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDH7O60245 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH7O60245 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH7O60245 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
PCDH7O60245 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH7O60245 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.64■□□□□ 0.58
PCDH7O60245 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDH7O60245 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDH7O60245 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDH7O60245 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDH7O60245 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDH7O60245 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDH7O60245 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 SOX15-203ENST00000570788 1093 ntBASIC18.64■□□□□ 0.57
PCDH7O60245 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDH7O60245 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.64■□□□□ 0.57
PCDH7O60245 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDH7O60245 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDH7O60245 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDH7O60245 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PCDH7O60245 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PCDH7O60245 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDH7O60245 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDH7O60245 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH7O60245 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH7O60245 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH7O60245 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH7O60245 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH7O60245 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH7O60245 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDH7O60245 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH7O60245 AL355802.2-201ENST00000402069 882 ntBASIC18.63■□□□□ 0.57
PCDH7O60245 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDH7O60245 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH7O60245 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDH7O60245 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDH7O60245 AL032819.2-201ENST00000624543 2162 ntBASIC18.63■□□□□ 0.57
PCDH7O60245 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH7O60245 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDH7O60245 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH7O60245 AC098818.2-201ENST00000564925 2320 ntBASIC18.63■□□□□ 0.57
PCDH7O60245 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
PCDH7O60245 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH7O60245 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDH7O60245 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms