Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AL356652.1-201ENST00000615962 565 ntBASIC18.81■□□□□ 0.6
SLC28A2O43868 MIR6786-201ENST00000616843 113 ntBASIC18.81■□□□□ 0.6
SLC28A2O43868 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC28A2O43868 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC28A2O43868 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC28A2O43868 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SLC28A2O43868 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A2O43868 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC28A2O43868 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SLC28A2O43868 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC28A2O43868 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC28A2O43868 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SLC28A2O43868 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC28A2O43868 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SLC28A2O43868 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SLC28A2O43868 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 KRT18P68-201ENST00000392293 1000 ntBASIC18.8■□□□□ 0.6
SLC28A2O43868 AC005521.1-201ENST00000393351 872 ntBASIC18.8■□□□□ 0.6
SLC28A2O43868 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC28A2O43868 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC28A2O43868 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC28A2O43868 RARRES2P10-201ENST00000564312 460 ntBASIC18.8■□□□□ 0.6
SLC28A2O43868 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.8■□□□□ 0.6
SLC28A2O43868 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC28A2O43868 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC28A2O43868 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC28A2O43868 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 AC087633.2-202ENST00000565166 1439 ntBASIC18.8■□□□□ 0.6
SLC28A2O43868 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
SLC28A2O43868 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC28A2O43868 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC28A2O43868 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC28A2O43868 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC28A2O43868 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC28A2O43868 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC28A2O43868 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC28A2O43868 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SLC28A2O43868 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC28A2O43868 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SLC28A2O43868 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC28A2O43868 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC28A2O43868 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC28A2O43868 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC28A2O43868 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC28A2O43868 TPM4P1-201ENST00000436100 807 ntBASIC18.79■□□□□ 0.6
SLC28A2O43868 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC28A2O43868 AP003071.4-201ENST00000562276 1284 ntBASIC18.79■□□□□ 0.6
SLC28A2O43868 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC28A2O43868 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.79■□□□□ 0.6
SLC28A2O43868 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC28A2O43868 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLC28A2O43868 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.79■□□□□ 0.6
SLC28A2O43868 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SLC28A2O43868 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SLC28A2O43868 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC28A2O43868 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SLC28A2O43868 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC28A2O43868 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC28A2O43868 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC28A2O43868 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC28A2O43868 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC28A2O43868 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SLC28A2O43868 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SLC28A2O43868 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC28A2O43868 AC087388.1-201ENST00000571370 1112 ntBASIC18.78■□□□□ 0.6
SLC28A2O43868 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.78■□□□□ 0.6
SLC28A2O43868 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SLC28A2O43868 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SLC28A2O43868 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.78■□□□□ 0.6
SLC28A2O43868 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC28A2O43868 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SLC28A2O43868 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC28A2O43868 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms