Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.66■□□□□ 0.26
SSNA1O43805 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.66■□□□□ 0.26
SSNA1O43805 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 AC004987.1-201ENST00000428627 508 ntBASIC16.66■□□□□ 0.26
SSNA1O43805 AC010997.5-201ENST00000609182 354 ntBASIC16.66■□□□□ 0.26
SSNA1O43805 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.66■□□□□ 0.26
SSNA1O43805 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.66■□□□□ 0.26
SSNA1O43805 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSNA1O43805 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.66■□□□□ 0.26
SSNA1O43805 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.66■□□□□ 0.26
SSNA1O43805 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.66■□□□□ 0.26
SSNA1O43805 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.66■□□□□ 0.26
SSNA1O43805 WIZP1-201ENST00000531444 2299 ntBASIC16.66■□□□□ 0.26
SSNA1O43805 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.66■□□□□ 0.26
SSNA1O43805 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSNA1O43805 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.65■□□□□ 0.26
SSNA1O43805 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SSNA1O43805 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.65■□□□□ 0.26
SSNA1O43805 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSNA1O43805 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSNA1O43805 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSNA1O43805 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.65■□□□□ 0.26
SSNA1O43805 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.65■□□□□ 0.26
SSNA1O43805 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SSNA1O43805 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.65■□□□□ 0.26
SSNA1O43805 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SSNA1O43805 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.65■□□□□ 0.26
SSNA1O43805 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SSNA1O43805 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSNA1O43805 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSNA1O43805 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.65■□□□□ 0.26
SSNA1O43805 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.65■□□□□ 0.26
SSNA1O43805 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSNA1O43805 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SSNA1O43805 AL354751.1-201ENST00000412768 1863 ntBASIC16.65■□□□□ 0.26
SSNA1O43805 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSNA1O43805 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSNA1O43805 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SSNA1O43805 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.64■□□□□ 0.25
SSNA1O43805 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSNA1O43805 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SSNA1O43805 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSNA1O43805 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.64■□□□□ 0.25
SSNA1O43805 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SSNA1O43805 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.64■□□□□ 0.25
SSNA1O43805 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.64■□□□□ 0.25
SSNA1O43805 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSNA1O43805 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSNA1O43805 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SSNA1O43805 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSNA1O43805 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSNA1O43805 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.64■□□□□ 0.25
SSNA1O43805 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SSNA1O43805 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSNA1O43805 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSNA1O43805 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SSNA1O43805 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.63■□□□□ 0.25
SSNA1O43805 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.63■□□□□ 0.25
SSNA1O43805 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.63■□□□□ 0.25
SSNA1O43805 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SSNA1O43805 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SSNA1O43805 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.63■□□□□ 0.25
SSNA1O43805 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.63■□□□□ 0.25
SSNA1O43805 BICD1-207ENST00000551848 1962 ntBASIC16.63■□□□□ 0.25
SSNA1O43805 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SSNA1O43805 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SSNA1O43805 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.63■□□□□ 0.25
SSNA1O43805 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.63■□□□□ 0.25
SSNA1O43805 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.63■□□□□ 0.25
SSNA1O43805 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SSNA1O43805 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SSNA1O43805 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 AC009237.3-201ENST00000393279 1427 ntBASIC16.62■□□□□ 0.25
SSNA1O43805 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.62■□□□□ 0.25
SSNA1O43805 AC006333.2-201ENST00000607957 2099 ntBASIC16.62■□□□□ 0.25
SSNA1O43805 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.62■□□□□ 0.25
SSNA1O43805 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.62■□□□□ 0.25
SSNA1O43805 SMUG1P1-201ENST00000590640 811 ntBASIC16.62■□□□□ 0.25
SSNA1O43805 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.62■□□□□ 0.25
SSNA1O43805 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 AC009237.14-201ENST00000609975 1594 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms