Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.8■□□□□ 0.76
SMAD6O43541 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.8■□□□□ 0.76
SMAD6O43541 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.8■□□□□ 0.76
SMAD6O43541 AL445675.2-201ENST00000620291 557 ntBASIC19.8■□□□□ 0.76
SMAD6O43541 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
SMAD6O43541 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMAD6O43541 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SMAD6O43541 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SMAD6O43541 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SMAD6O43541 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.79■□□□□ 0.76
SMAD6O43541 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMAD6O43541 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.79■□□□□ 0.76
SMAD6O43541 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.79■□□□□ 0.76
SMAD6O43541 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.79■□□□□ 0.76
SMAD6O43541 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMAD6O43541 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMAD6O43541 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SMAD6O43541 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.79■□□□□ 0.76
SMAD6O43541 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMAD6O43541 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMAD6O43541 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.79■□□□□ 0.76
SMAD6O43541 NUDT16P1-203ENST00000513809 620 ntBASIC19.79■□□□□ 0.76
SMAD6O43541 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.79■□□□□ 0.76
SMAD6O43541 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.79■□□□□ 0.76
SMAD6O43541 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMAD6O43541 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.79■□□□□ 0.76
SMAD6O43541 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMAD6O43541 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMAD6O43541 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SMAD6O43541 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMAD6O43541 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMAD6O43541 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SMAD6O43541 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.79■□□□□ 0.76
SMAD6O43541 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SMAD6O43541 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.78■□□□□ 0.76
SMAD6O43541 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SMAD6O43541 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.78■□□□□ 0.76
SMAD6O43541 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SMAD6O43541 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.78■□□□□ 0.76
SMAD6O43541 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.78■□□□□ 0.76
SMAD6O43541 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.78■□□□□ 0.76
SMAD6O43541 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SMAD6O43541 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.78■□□□□ 0.76
SMAD6O43541 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.78■□□□□ 0.76
SMAD6O43541 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMAD6O43541 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.77■□□□□ 0.76
SMAD6O43541 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMAD6O43541 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.77■□□□□ 0.76
SMAD6O43541 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMAD6O43541 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMAD6O43541 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMAD6O43541 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.77■□□□□ 0.76
SMAD6O43541 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.77■□□□□ 0.76
SMAD6O43541 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMAD6O43541 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMAD6O43541 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.77■□□□□ 0.76
SMAD6O43541 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.77■□□□□ 0.76
SMAD6O43541 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMAD6O43541 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMAD6O43541 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.77■□□□□ 0.76
SMAD6O43541 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.77■□□□□ 0.76
SMAD6O43541 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.77■□□□□ 0.76
SMAD6O43541 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.77■□□□□ 0.76
SMAD6O43541 REXO1L10P-201ENST00000615707 1290 ntBASIC19.77■□□□□ 0.76
SMAD6O43541 REXO1L12P-201ENST00000622156 912 ntBASIC19.77■□□□□ 0.76
SMAD6O43541 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMAD6O43541 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMAD6O43541 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SMAD6O43541 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMAD6O43541 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.77■□□□□ 0.75
SMAD6O43541 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMAD6O43541 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMAD6O43541 LINC01465-201ENST00000408887 1940 ntBASIC19.76■□□□□ 0.75
SMAD6O43541 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMAD6O43541 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.76■□□□□ 0.75
SMAD6O43541 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMAD6O43541 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.76■□□□□ 0.75
SMAD6O43541 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMAD6O43541 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMAD6O43541 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMAD6O43541 AC004980.1-204ENST00000429707 299 ntBASIC19.76■□□□□ 0.75
SMAD6O43541 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SMAD6O43541 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SMAD6O43541 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.76■□□□□ 0.75
SMAD6O43541 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.76■□□□□ 0.75
SMAD6O43541 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.76■□□□□ 0.75
SMAD6O43541 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms