Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TO15178 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.02■□□□□ 0.48
TO15178 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TO15178 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TO15178 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TO15178 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TO15178 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TO15178 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TO15178 UBE2SP1-201ENST00000450587 669 ntBASIC18.02■□□□□ 0.48
TO15178 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.02■□□□□ 0.48
TO15178 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.02■□□□□ 0.48
TO15178 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TO15178 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.02■□□□□ 0.48
TO15178 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.02■□□□□ 0.48
TO15178 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TO15178 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TO15178 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.02■□□□□ 0.48
TO15178 C1QL1P1-201ENST00000568105 661 ntBASIC18.02■□□□□ 0.48
TO15178 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.02■□□□□ 0.48
TO15178 FAM197Y4-202ENST00000622692 608 ntBASIC18.02■□□□□ 0.48
TO15178 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TO15178 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TO15178 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.02■□□□□ 0.47
TO15178 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TO15178 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TO15178 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TO15178 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TO15178 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TO15178 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TO15178 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.01■□□□□ 0.47
TO15178 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
TO15178 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.01■□□□□ 0.47
TO15178 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TO15178 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TO15178 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TO15178 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
TO15178 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.01■□□□□ 0.47
TO15178 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TO15178 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.01■□□□□ 0.47
TO15178 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.01■□□□□ 0.47
TO15178 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
TO15178 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TO15178 PCDHAC2-203ENST00000615316 3011 ntBASIC18.01■□□□□ 0.47
TO15178 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.01■□□□□ 0.47
TO15178 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18■□□□□ 0.47
TO15178 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18■□□□□ 0.47
TO15178 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TO15178 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18■□□□□ 0.47
TO15178 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18■□□□□ 0.47
TO15178 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18■□□□□ 0.47
TO15178 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 AL158047.1-201ENST00000445918 881 ntBASIC18■□□□□ 0.47
TO15178 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18■□□□□ 0.47
TO15178 RARRES2P10-201ENST00000564312 460 ntBASIC18■□□□□ 0.47
TO15178 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18■□□□□ 0.47
TO15178 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18■□□□□ 0.47
TO15178 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18■□□□□ 0.47
TO15178 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18■□□□□ 0.47
TO15178 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18■□□□□ 0.47
TO15178 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TO15178 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TO15178 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18■□□□□ 0.47
TO15178 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.99■□□□□ 0.47
TO15178 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TO15178 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TO15178 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.99■□□□□ 0.47
TO15178 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.99■□□□□ 0.47
TO15178 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.99■□□□□ 0.47
TO15178 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.99■□□□□ 0.47
TO15178 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.99■□□□□ 0.47
TO15178 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.99■□□□□ 0.47
TO15178 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.99■□□□□ 0.47
TO15178 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TO15178 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TO15178 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.99■□□□□ 0.47
TO15178 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TO15178 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms