Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 AC244015.2-201ENST00000616358 1861 ntBASIC20.67■□□□□ 0.9
TRANK1O15050 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.67■□□□□ 0.9
TRANK1O15050 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRANK1O15050 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.67■□□□□ 0.9
TRANK1O15050 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.67■□□□□ 0.9
TRANK1O15050 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.67■□□□□ 0.9
TRANK1O15050 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRANK1O15050 PLK5-205ENST00000642079 1969 ntBASIC20.67■□□□□ 0.9
TRANK1O15050 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRANK1O15050 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.67■□□□□ 0.9
TRANK1O15050 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.67■□□□□ 0.9
TRANK1O15050 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.67■□□□□ 0.9
TRANK1O15050 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.67■□□□□ 0.9
TRANK1O15050 AC140113.3-201ENST00000605663 199 ntBASIC20.67■□□□□ 0.9
TRANK1O15050 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRANK1O15050 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRANK1O15050 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.66■□□□□ 0.9
TRANK1O15050 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRANK1O15050 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.66■□□□□ 0.9
TRANK1O15050 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.66■□□□□ 0.9
TRANK1O15050 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRANK1O15050 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRANK1O15050 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
TRANK1O15050 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRANK1O15050 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRANK1O15050 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRANK1O15050 AF106564.1-201ENST00000607058 2553 ntBASIC20.65■□□□□ 0.9
TRANK1O15050 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRANK1O15050 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRANK1O15050 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRANK1O15050 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRANK1O15050 HBZP1-201ENST00000354915 429 ntBASIC20.65■□□□□ 0.9
TRANK1O15050 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.65■□□□□ 0.9
TRANK1O15050 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.65■□□□□ 0.9
TRANK1O15050 AL732292.2-201ENST00000609649 430 ntBASIC20.65■□□□□ 0.9
TRANK1O15050 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRANK1O15050 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
TRANK1O15050 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.65■□□□□ 0.9
TRANK1O15050 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.65■□□□□ 0.9
TRANK1O15050 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRANK1O15050 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRANK1O15050 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRANK1O15050 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
TRANK1O15050 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRANK1O15050 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRANK1O15050 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.64■□□□□ 0.9
TRANK1O15050 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.64■□□□□ 0.9
TRANK1O15050 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
TRANK1O15050 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.64■□□□□ 0.9
TRANK1O15050 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRANK1O15050 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRANK1O15050 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRANK1O15050 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.64■□□□□ 0.89
TRANK1O15050 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRANK1O15050 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.64■□□□□ 0.89
TRANK1O15050 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRANK1O15050 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.64■□□□□ 0.89
TRANK1O15050 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
TRANK1O15050 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TRANK1O15050 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRANK1O15050 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRANK1O15050 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRANK1O15050 AC112907.2-201ENST00000448639 330 ntBASIC20.63■□□□□ 0.89
TRANK1O15050 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRANK1O15050 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.63■□□□□ 0.89
TRANK1O15050 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRANK1O15050 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.63■□□□□ 0.89
TRANK1O15050 LINC01311-201ENST00000565162 1445 ntBASIC20.63■□□□□ 0.89
TRANK1O15050 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRANK1O15050 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRANK1O15050 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.63■□□□□ 0.89
TRANK1O15050 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.63■□□□□ 0.89
TRANK1O15050 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRANK1O15050 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRANK1O15050 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRANK1O15050 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRANK1O15050 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRANK1O15050 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TRANK1O15050 EMBP1-201ENST00000458200 901 ntBASIC20.62■□□□□ 0.89
TRANK1O15050 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.62■□□□□ 0.89
TRANK1O15050 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRANK1O15050 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.62■□□□□ 0.89
TRANK1O15050 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRANK1O15050 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRANK1O15050 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRANK1O15050 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.62■□□□□ 0.89
TRANK1O15050 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRANK1O15050 ECEL1P1-201ENST00000373592 1742 ntBASIC20.62■□□□□ 0.89
TRANK1O15050 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRANK1O15050 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRANK1O15050 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRANK1O15050 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRANK1O15050 FBXW4P1-201ENST00000426721 2239 ntBASIC20.61■□□□□ 0.89
TRANK1O15050 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.61■□□□□ 0.89
TRANK1O15050 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRANK1O15050 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRANK1O15050 AL022342.1-201ENST00000400363 863 ntBASIC20.61■□□□□ 0.89
TRANK1O15050 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.61■□□□□ 0.89
TRANK1O15050 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.61■□□□□ 0.89
TRANK1O15050 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms