Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBFD1O14562 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.98■□□□□ 0.63
UBFD1O14562 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBFD1O14562 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBFD1O14562 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBFD1O14562 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBFD1O14562 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
UBFD1O14562 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
UBFD1O14562 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBFD1O14562 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBFD1O14562 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
UBFD1O14562 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
UBFD1O14562 MIR663A-201ENST00000385250 93 ntBASIC18.97■□□□□ 0.63
UBFD1O14562 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBFD1O14562 CROCCP5-201ENST00000436658 830 ntBASIC18.97■□□□□ 0.63
UBFD1O14562 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.97■□□□□ 0.63
UBFD1O14562 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UBFD1O14562 AC005829.2-201ENST00000571422 1056 ntBASIC18.97■□□□□ 0.63
UBFD1O14562 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.97■□□□□ 0.63
UBFD1O14562 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
UBFD1O14562 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UBFD1O14562 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.97■□□□□ 0.63
UBFD1O14562 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
UBFD1O14562 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.97■□□□□ 0.63
UBFD1O14562 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBFD1O14562 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UBFD1O14562 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.96■□□□□ 0.63
UBFD1O14562 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UBFD1O14562 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UBFD1O14562 AC124283.5-201ENST00000624661 1809 ntBASIC18.96■□□□□ 0.63
UBFD1O14562 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.96■□□□□ 0.63
UBFD1O14562 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.96■□□□□ 0.63
UBFD1O14562 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
UBFD1O14562 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
UBFD1O14562 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.96■□□□□ 0.63
UBFD1O14562 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
UBFD1O14562 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
UBFD1O14562 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.96■□□□□ 0.63
UBFD1O14562 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBFD1O14562 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.95■□□□□ 0.62
UBFD1O14562 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBFD1O14562 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBFD1O14562 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBFD1O14562 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.95■□□□□ 0.62
UBFD1O14562 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBFD1O14562 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
UBFD1O14562 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
UBFD1O14562 AC073210.2-201ENST00000430369 194 ntBASIC18.95■□□□□ 0.62
UBFD1O14562 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.95■□□□□ 0.62
UBFD1O14562 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBFD1O14562 AC026185.1-201ENST00000445748 174 ntBASIC18.95■□□□□ 0.62
UBFD1O14562 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.95■□□□□ 0.62
UBFD1O14562 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.95■□□□□ 0.62
UBFD1O14562 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.95■□□□□ 0.62
UBFD1O14562 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.95■□□□□ 0.62
UBFD1O14562 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.95■□□□□ 0.62
UBFD1O14562 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
UBFD1O14562 CROCCP3-202ENST00000420820 1947 ntBASIC18.95■□□□□ 0.62
UBFD1O14562 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
UBFD1O14562 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
UBFD1O14562 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.95■□□□□ 0.62
UBFD1O14562 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBFD1O14562 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBFD1O14562 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.95■□□□□ 0.62
UBFD1O14562 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBFD1O14562 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBFD1O14562 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
UBFD1O14562 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBFD1O14562 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.95■□□□□ 0.62
UBFD1O14562 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBFD1O14562 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.94■□□□□ 0.62
UBFD1O14562 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBFD1O14562 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.94■□□□□ 0.62
UBFD1O14562 MIPEPP3-201ENST00000412105 444 ntBASIC18.94■□□□□ 0.62
UBFD1O14562 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.94■□□□□ 0.62
UBFD1O14562 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.94■□□□□ 0.62
UBFD1O14562 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBFD1O14562 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
UBFD1O14562 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBFD1O14562 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.94■□□□□ 0.62
UBFD1O14562 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBFD1O14562 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
UBFD1O14562 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBFD1O14562 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBFD1O14562 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBFD1O14562 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
UBFD1O14562 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
UBFD1O14562 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms