Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.65■□□□□ 0.58
RTCAO00442 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.65■□□□□ 0.58
RTCAO00442 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 KRT17P3-201ENST00000420566 1262 ntBASIC18.65■□□□□ 0.58
RTCAO00442 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.65■□□□□ 0.58
RTCAO00442 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RTCAO00442 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.65■□□□□ 0.58
RTCAO00442 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RTCAO00442 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RTCAO00442 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.65■□□□□ 0.58
RTCAO00442 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.65■□□□□ 0.58
RTCAO00442 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTCAO00442 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RTCAO00442 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.64■□□□□ 0.57
RTCAO00442 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.64■□□□□ 0.57
RTCAO00442 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTCAO00442 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.64■□□□□ 0.57
RTCAO00442 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTCAO00442 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RTCAO00442 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.64■□□□□ 0.57
RTCAO00442 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RTCAO00442 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.64■□□□□ 0.57
RTCAO00442 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.64■□□□□ 0.57
RTCAO00442 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.64■□□□□ 0.57
RTCAO00442 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.64■□□□□ 0.57
RTCAO00442 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.64■□□□□ 0.57
RTCAO00442 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTCAO00442 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.64■□□□□ 0.57
RTCAO00442 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTCAO00442 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RTCAO00442 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
RTCAO00442 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTCAO00442 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTCAO00442 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.63■□□□□ 0.57
RTCAO00442 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTCAO00442 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RTCAO00442 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.63■□□□□ 0.57
RTCAO00442 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTCAO00442 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RTCAO00442 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTCAO00442 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.63■□□□□ 0.57
RTCAO00442 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.63■□□□□ 0.57
RTCAO00442 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.63■□□□□ 0.57
RTCAO00442 AC006058.3-201ENST00000606217 1069 ntBASIC18.63■□□□□ 0.57
RTCAO00442 AC093484.2-201ENST00000580996 2166 ntBASIC18.63■□□□□ 0.57
RTCAO00442 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTCAO00442 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTCAO00442 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTCAO00442 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTCAO00442 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTCAO00442 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RTCAO00442 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTCAO00442 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RTCAO00442 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.62■□□□□ 0.57
RTCAO00442 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTCAO00442 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTCAO00442 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTCAO00442 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTCAO00442 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTCAO00442 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTCAO00442 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.62■□□□□ 0.57
RTCAO00442 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.62■□□□□ 0.57
RTCAO00442 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.62■□□□□ 0.57
RTCAO00442 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTCAO00442 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
RTCAO00442 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.62■□□□□ 0.57
RTCAO00442 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.62■□□□□ 0.57
RTCAO00442 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.62■□□□□ 0.57
RTCAO00442 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTCAO00442 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.62■□□□□ 0.57
RTCAO00442 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RTCAO00442 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.62■□□□□ 0.57
RTCAO00442 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.62■□□□□ 0.57
RTCAO00442 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.62■□□□□ 0.57
RTCAO00442 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RTCAO00442 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RTCAO00442 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.61■□□□□ 0.57
RTCAO00442 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RTCAO00442 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.61■□□□□ 0.57
RTCAO00442 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.61■□□□□ 0.57
RTCAO00442 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
RTCAO00442 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.61■□□□□ 0.57
RTCAO00442 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTCAO00442 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms