Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TAF4O00268 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TAF4O00268 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TAF4O00268 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TAF4O00268 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TAF4O00268 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TAF4O00268 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.1■□□□□ 0.65
TAF4O00268 AL450487.1-201ENST00000426799 995 ntBASIC19.1■□□□□ 0.65
TAF4O00268 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.1■□□□□ 0.65
TAF4O00268 AC022616.7-201ENST00000525383 220 ntBASIC19.1■□□□□ 0.65
TAF4O00268 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TAF4O00268 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.1■□□□□ 0.65
TAF4O00268 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.1■□□□□ 0.65
TAF4O00268 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.1■□□□□ 0.65
TAF4O00268 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.1■□□□□ 0.65
TAF4O00268 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TAF4O00268 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TAF4O00268 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TAF4O00268 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TAF4O00268 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TAF4O00268 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TAF4O00268 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TAF4O00268 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TAF4O00268 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.09■□□□□ 0.65
TAF4O00268 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TAF4O00268 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 AK4P3-201ENST00000418260 669 ntBASIC19.09■□□□□ 0.65
TAF4O00268 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.09■□□□□ 0.65
TAF4O00268 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.09■□□□□ 0.65
TAF4O00268 AC063952.2-201ENST00000498792 1227 ntBASIC19.09■□□□□ 0.65
TAF4O00268 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.09■□□□□ 0.65
TAF4O00268 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.09■□□□□ 0.65
TAF4O00268 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.09■□□□□ 0.65
TAF4O00268 AL121829.2-201ENST00000620908 328 ntBASIC19.09■□□□□ 0.65
TAF4O00268 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.09■□□□□ 0.65
TAF4O00268 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TAF4O00268 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TAF4O00268 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
TAF4O00268 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.08■□□□□ 0.65
TAF4O00268 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TAF4O00268 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TAF4O00268 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TAF4O00268 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TAF4O00268 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TAF4O00268 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TAF4O00268 AL031133.1-201ENST00000406807 723 ntBASIC19.08■□□□□ 0.64
TAF4O00268 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TAF4O00268 ATP5G1P1-201ENST00000448724 379 ntBASIC19.08■□□□□ 0.64
TAF4O00268 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.08■□□□□ 0.64
TAF4O00268 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TAF4O00268 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.08■□□□□ 0.64
TAF4O00268 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TAF4O00268 MYC-208ENST00000641036 567 ntBASIC19.08■□□□□ 0.64
TAF4O00268 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TAF4O00268 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TAF4O00268 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TAF4O00268 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TAF4O00268 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TAF4O00268 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TAF4O00268 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TAF4O00268 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.07■□□□□ 0.64
TAF4O00268 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.07■□□□□ 0.64
TAF4O00268 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.07■□□□□ 0.64
TAF4O00268 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TAF4O00268 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TAF4O00268 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TAF4O00268 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TAF4O00268 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TAF4O00268 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.07■□□□□ 0.64
TAF4O00268 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.07■□□□□ 0.64
TAF4O00268 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TAF4O00268 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.07■□□□□ 0.64
TAF4O00268 GPALPP1-207ENST00000611650 899 ntBASIC19.07■□□□□ 0.64
TAF4O00268 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TAF4O00268 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TAF4O00268 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.07■□□□□ 0.64
TAF4O00268 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TAF4O00268 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TAF4O00268 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TAF4O00268 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TAF4O00268 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TAF4O00268 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TAF4O00268 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.06■□□□□ 0.64
TAF4O00268 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.06■□□□□ 0.64
TAF4O00268 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.06■□□□□ 0.64
TAF4O00268 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TAF4O00268 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.06■□□□□ 0.64
TAF4O00268 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms