Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 AC073195.1-201ENST00000607241 877 ntBASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 BX119927.1-201ENST00000636596 1552 ntBASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 AC099778.1-201ENST00000568593 1911 ntBASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NPIPA3F8WFD2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NPIPA3F8WFD2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 AC087499.1-201ENST00000418141 1075 ntBASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NPIPA3F8WFD2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.79■□□□□ 0.44
NPIPA3F8WFD2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms