Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM1B2RUZ4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM1B2RUZ4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC13.24□□□□□ -0.29
SMIM1B2RUZ4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM1B2RUZ4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC13.24□□□□□ -0.29
SMIM1B2RUZ4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM1B2RUZ4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM1B2RUZ4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM1B2RUZ4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM1B2RUZ4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SMIM1B2RUZ4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
SMIM1B2RUZ4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 HLA-G-202ENST00000376815 851 ntBASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 HLA-G-203ENST00000376818 1127 ntBASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.22□□□□□ -0.29
SMIM1B2RUZ4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 AL390961.4-201ENST00000623958 2535 ntBASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 AC141586.3-201ENST00000562166 1838 ntBASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 HCG11-201ENST00000411553 5696 ntBASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 AL591742.1-201ENST00000604433 565 ntBASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SMIM1B2RUZ4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms