Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 RPPH1-201ENST00000516869 333 ntBASIC20.22■□□□□ 0.83
SRRM3A6NNA2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SRRM3A6NNA2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 AC010141.2-201ENST00000452426 721 ntBASIC20.21■□□□□ 0.83
SRRM3A6NNA2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SRRM3A6NNA2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.2■□□□□ 0.82
SRRM3A6NNA2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 C1QBPP2-201ENST00000528754 825 ntBASIC20.19■□□□□ 0.82
SRRM3A6NNA2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRRM3A6NNA2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.18■□□□□ 0.82
SRRM3A6NNA2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms