Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPDYE4A6NLX3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 AC020907.5-201ENST00000624372 1936 ntBASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 MIR718-201ENST00000390190 70 ntBASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 AL512408.1-201ENST00000569378 2000 ntBASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.92■■□□□ 1.1
SPDYE4A6NLX3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 AC099778.1-201ENST00000568593 1911 ntBASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 AL359736.2-201ENST00000621992 437 ntBASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPDYE4A6NLX3 PLK5-205ENST00000642079 1969 ntBASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 PNMA6B-201ENST00000538162 1200 ntBASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 BNIP3P41-202ENST00000616656 861 ntBASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.9■■□□□ 1.1
SPDYE4A6NLX3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SPDYE4A6NLX3 AL158211.5-201ENST00000623583 2518 ntBASIC21.89■■□□□ 1.1
SPDYE4A6NLX3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SPDYE4A6NLX3 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SPDYE4A6NLX3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SPDYE4A6NLX3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SPDYE4A6NLX3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.89■■□□□ 1.1
SPDYE4A6NLX3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SPDYE4A6NLX3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.89■■□□□ 1.1
SPDYE4A6NLX3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SPDYE4A6NLX3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.89■■□□□ 1.1
SPDYE4A6NLX3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 KRT18P68-201ENST00000392293 1000 ntBASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 AC007322.3-201ENST00000426526 701 ntBASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.89■■□□□ 1.09
SPDYE4A6NLX3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SPDYE4A6NLX3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms