Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 AC090192.1-201ENST00000517740 490 ntBASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 PNMA6B-201ENST00000538162 1200 ntBASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 AC104771.1-201ENST00000603335 964 ntBASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.54■■□□□ 1.04
TRIM49BA6NDI0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM49BA6NDI0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 AC060766.5-201ENST00000590539 871 ntBASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM49BA6NDI0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.52■■□□□ 1.03
TRIM49BA6NDI0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
TRIM49BA6NDI0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
TRIM49BA6NDI0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
TRIM49BA6NDI0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM49BA6NDI0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms