Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRBV6-4A0A1B0GX49 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC142086.2-201ENST00000569753 217 ntBASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 AP006587.1-201ENST00000534129 1502 ntBASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.79□□□□□ -0.2
TRBV6-4A0A1B0GX49 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 BX323043.1-201ENST00000641006 1765 ntBASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 YBX1P10-201ENST00000444752 975 ntBASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC104771.1-201ENST00000603335 964 ntBASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC083880.1-201ENST00000608266 535 ntBASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC120498.8-201ENST00000614275 531 ntBASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 AL121829.2-201ENST00000620908 328 ntBASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
TRBV6-4A0A1B0GX49 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV6-4A0A1B0GX49 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
TRBV6-4A0A1B0GX49 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV6-4A0A1B0GX49 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.77□□□□□ -0.2
TRBV6-4A0A1B0GX49 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRBV6-4A0A1B0GX49 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 SLC29A4P2-201ENST00000504749 1089 ntBASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 AC090192.1-201ENST00000517740 490 ntBASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.77□□□□□ -0.21
TRBV6-4A0A1B0GX49 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms