Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 HCG4P8-203ENST00000443049 980 ntBASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 LINC01465-201ENST00000408887 1940 ntBASIC24.98■■□□□ 1.59
LOC102724428A0A0B4J2F2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 KRT8P45-201ENST00000414328 1447 ntBASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 NME1-207ENST00000480143 964 ntTSL 2 BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 CKBP1-201ENST00000565489 1086 ntBASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
LOC102724428A0A0B4J2F2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC24.96■■□□□ 1.59
LOC102724428A0A0B4J2F2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
LOC102724428A0A0B4J2F2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
LOC102724428A0A0B4J2F2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LOC102724428A0A0B4J2F2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LOC102724428A0A0B4J2F2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC24.96■■□□□ 1.59
LOC102724428A0A0B4J2F2 CLEC4GP1-201ENST00000596555 870 ntBASIC24.96■■□□□ 1.59
LOC102724428A0A0B4J2F2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC24.96■■□□□ 1.59
LOC102724428A0A0B4J2F2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
LOC102724428A0A0B4J2F2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC24.96■■□□□ 1.59
LOC102724428A0A0B4J2F2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.96■■□□□ 1.59
LOC102724428A0A0B4J2F2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
LOC102724428A0A0B4J2F2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
LOC102724428A0A0B4J2F2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.59
LOC102724428A0A0B4J2F2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.95■■□□□ 1.59
LOC102724428A0A0B4J2F2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
LOC102724428A0A0B4J2F2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 AC026396.1-201ENST00000419388 421 ntBASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 KRT8P41-201ENST00000533985 1514 ntBASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.95■■□□□ 1.58
LOC102724428A0A0B4J2F2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 AL136038.3-201ENST00000561909 1096 ntBASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 AC069148.1-201ENST00000608741 768 ntBASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LOC102724428A0A0B4J2F2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC24.93■■□□□ 1.58
LOC102724428A0A0B4J2F2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms