Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV34A0A0B4J273 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRAV34A0A0B4J273 OR6D1P-202ENST00000641007 5290 ntBASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 AC012313.1-201ENST00000593393 3059 ntBASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 AC007322.3-201ENST00000426526 701 ntBASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 AC010141.2-201ENST00000452426 721 ntBASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV34A0A0B4J273 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV34A0A0B4J273 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV34A0A0B4J273 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV34A0A0B4J273 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV34A0A0B4J273 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV34A0A0B4J273 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV34A0A0B4J273 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 PBX2P1-201ENST00000493219 1291 ntBASIC15.08■□□□□ 0
TRAV34A0A0B4J273 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 AP001330.3-201ENST00000520123 633 ntBASIC15.08■□□□□ 0
TRAV34A0A0B4J273 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 FAM21FP-204ENST00000608637 956 ntBASIC15.08■□□□□ 0
TRAV34A0A0B4J273 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV34A0A0B4J273 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 AC091799.1-201ENST00000422823 811 ntBASIC15.07■□□□□ 0
TRAV34A0A0B4J273 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms